RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 ARL1P40616 181 aaPredicted RBP11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 SPARCL1Q14515 664 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 TRIP13Q15645 432 aaPredicted RBP11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 BRDTQ58F21 947 aaPredicted RBP11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 AGBL2Q5U5Z8 902 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 DNAJC24Q6P3W2 148 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 POTEGQ6S5H5 508 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 SUGCTQ9HAC7 445 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 LCMT1Q9UIC8 334 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L20D6RJB6 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 PRLRP16471 622 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L24Q0WX57 530 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 BYSLQ13895 437 aaKnown RBP11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 NAB2Q15742 525 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 FIGNQ5HY92 759 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 TTBK2Q6IQ55 1244 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 USP17L6PQ6QN14 398 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 RFX6Q8HWS3 928 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 RPUSD2Q8IZ73 545 aaKnown RBP11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 SCYL3Q8IZE3 742 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 ADGRF4Q8IZF3 695 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 FLAD1Q8NFF5 587 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 MS4A14Q96JA4 679 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 CCT8L2Q96SF2 557 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 CD209Q9NNX6 404 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 ANKFY1Q9P2R3 1169 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 BAG2O95816 211 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 LMNAP02545 664 aaKnown RBP11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 HOXA13P31271 388 aaPredicted RBP11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 MAP7Q14244 749 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 EDRF1Q3B7T1 1238 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 CCDC93Q567U6 631 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 XXYLT1Q8NBI6 393 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 SMC1BQ8NDV3 1235 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 CDKL2Q92772 493 aa11.74□□□□□ -0.53
CDC42EP3-206ENST00000611976 SFI1A8K8P3 1242 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 CA4P22748 312 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 PEX19P40855 299 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 TROAPQ12815 778 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 PIGOQ8TEQ8 1089 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 SEPT9Q9UHD8 586 aaPredicted RBP11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 AMACRQ9UHK6 382 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 PRDM4Q9UKN5 801 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 PLAGL2Q9UPG8 496 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 H7C0C1 242 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 MT-ND3P03897 115 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 TMOD1P28289 359 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 ATP5OP48047 213 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 NIM1KQ8IY84 436 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 NLGN1Q8N2Q7 840 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 SH2D3CQ8N5H7 860 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 MIPOL1Q8TD10 442 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 TTC25Q96NG3 672 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 ZIM3Q96PE6 472 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 NRBP2Q9NSY0 501 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 CNOT8Q9UFF9 292 aaKnown RBP11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 RAB21Q9UL25 225 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 IFT172Q9UG01 1749 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 MYMKA6NI61 221 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 MCF2LO15068 1137 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 SKIP12755 728 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 LSP1P33241 339 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 AP1ARQ63HQ0 302 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 FAM196AQ6ZSG2 479 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 HPS3Q969F9 1004 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 RNPC3Q96LT9 517 aaKnown RBP11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 ANKZF1Q9H8Y5 726 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 CASQ2O14958 399 aaPredicted RBP11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 SMARCA1P28370 1054 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 SARSP49591 514 aaKnown RBP11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 SF3B3Q15393 1217 aaKnown RBP11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 SCYL2Q6P3W7 929 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 ZNF564Q8TBZ8 553 aaPredicted RBP11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 GLG1Q92896 1179 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 ANAPC7Q9UJX3 599 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 USH1CQ9Y6N9 552 aa11.73□□□□□ -0.53
CDC42EP3-206ENST00000611976 KIF3CO14782 793 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 AGTP01019 485 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 PLS3P13797 630 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 GARSP41250 739 aaKnown RBP11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 TPD52P55327 224 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 ZNF211Q13398 564 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 GLYCTKQ8IVS8 523 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 PDCD7Q8N8D1 485 aaKnown RBP11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 CEP170P1Q96L14 293 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 SMIM24O75264 130 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 GMNNO75496 209 aa11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 FXR2P51116 673 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDC42EP3-206ENST00000611976 CCDC137Q6PK04 289 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms