RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 PLCB1Q9NQ66 1216 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 BAIAP2L1Q9UHR4 511 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 DBR1Q9UK59 544 aaKnown RBP22.18■■□□□ 1.14
SSBP3-216ENST00000610401 ZBTB21Q9ULJ3 1066 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 H0YGN5 161 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 RPS6KA4O75676 772 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 PLCG2P16885 1265 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 TMC3Q7Z5M5 1100 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 CCDC91Q7Z6B0 441 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 CACNA2D3Q8IZS8 1091 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 NFS1Q9Y697 457 aa22.18■■□□□ 1.14
SSBP3-216ENST00000610401 GNA14O95837 355 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 STAT1P42224 750 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 VPS41P49754 854 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 PPP4R3AQ6IN85 833 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 TCP11Q8WWU5 503 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 DNAJC12Q9UKB3 198 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 EML1O00423 815 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 TNFRSF8P28908 595 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 ZYXQ15942 572 aaKnown RBP22.17■■□□□ 1.14
SSBP3-216ENST00000610401 KIAA0825Q8IV33 1275 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 SUGP1Q8IWZ8 645 aaKnown RBP22.17■■□□□ 1.14
SSBP3-216ENST00000610401 CCDC26Q8TAB7 109 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 FBXO25Q8TCJ0 367 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 MYCBPQ99417 103 aaPredicted RBP22.17■■□□□ 1.14
SSBP3-216ENST00000610401 NCAPGQ9BPX3 1015 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 AZI2Q9H6S1 392 aa22.17■■□□□ 1.14
SSBP3-216ENST00000610401 CALCAP01258 141 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 PPP1R7Q15435 360 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 COBLL1Q53SF7 1204 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 TRAPPC3LQ5T215 181 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 NT5DC3Q86UY8 548 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 CTNNBL1Q8WYA6 563 aaPredicted RBP22.16■■□□□ 1.14
SSBP3-216ENST00000610401 HOOK2Q96ED9 719 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 FAM212AQ96EL1 285 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 POP1Q99575 1024 aaKnown RBP22.16■■□□□ 1.14
SSBP3-216ENST00000610401 ELAC2Q9BQ52 826 aaKnown RBP22.16■■□□□ 1.14
SSBP3-216ENST00000610401 ESYT2A0FGR8 921 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 PPP1R12BO60237 982 aaPredicted RBP22.16■■□□□ 1.14
SSBP3-216ENST00000610401 CLTAP09496 248 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 EEF2P13639 858 aaKnown RBP22.16■■□□□ 1.14
SSBP3-216ENST00000610401 MESDQ14696 234 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 CBWD6Q4V339 395 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 CBWD3Q5JTY5 395 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 CBWD5Q5RIA9 395 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 DCAF12L1Q5VU92 463 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 ARFGAP2Q8N6H7 521 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 SLC20A1Q8WUM9 679 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 SLC35C1Q96A29 364 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 THOC1Q96FV9 657 aaKnown RBP22.16■■□□□ 1.14
SSBP3-216ENST00000610401 FAM84AQ96KN4 292 aa22.16■■□□□ 1.14
SSBP3-216ENST00000610401 CLSTN1O94985 981 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 DR1Q01658 176 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 TRIP13Q15645 432 aaPredicted RBP22.15■■□□□ 1.14
SSBP3-216ENST00000610401 NSMFQ6X4W1 530 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 KRT35Q92764 455 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 NGLY1Q96IV0 654 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 PBKQ96KB5 322 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 EDEM3Q9BZQ6 932 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 FAM13AO94988 1023 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 CFBP00751 764 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 CHN1P15882 459 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 SLC29A2Q14542 456 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 SEPT2Q15019 361 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 RUFY4Q6ZNE9 571 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 FAM186BQ8IYM0 893 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 ZKSCAN4Q969J2 545 aaPredicted RBP22.15■■□□□ 1.14
SSBP3-216ENST00000610401 CTTNBP2NLQ9P2B4 639 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 SNX1Q13596 522 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 HIBCHQ6NVY1 386 aaPredicted RBP22.15■■□□□ 1.14
SSBP3-216ENST00000610401 EPS8L3Q8TE67 593 aaKnown RBP22.15■■□□□ 1.14
SSBP3-216ENST00000610401 ALG3Q92685 438 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 SYN2Q92777 582 aaPredicted RBP22.15■■□□□ 1.14
SSBP3-216ENST00000610401 FAM118BQ9BPY3 351 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 VCPKMTQ9H867 229 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 SLC12A6Q9UHW9 1150 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 KDM3AQ9Y4C1 1321 aa22.15■■□□□ 1.14
SSBP3-216ENST00000610401 TRAPPC3O43617 180 aa22.14■■□□□ 1.14
SSBP3-216ENST00000610401 CUL1Q13616 776 aa22.14■■□□□ 1.14
SSBP3-216ENST00000610401 EPHA7Q15375 998 aa22.14■■□□□ 1.14
SSBP3-216ENST00000610401 PRR5LQ6MZQ0 368 aa22.14■■□□□ 1.14
SSBP3-216ENST00000610401 PSMD1Q99460 953 aa22.14■■□□□ 1.14
SSBP3-216ENST00000610401 ADAM33Q9BZ11 813 aa22.14■■□□□ 1.14
SSBP3-216ENST00000610401 SEMA4AQ9H3S1 761 aa22.14■■□□□ 1.14
SSBP3-216ENST00000610401 TMEM59LQ9UK28 342 aa22.14■■□□□ 1.14
SSBP3-216ENST00000610401 THRAP3Q9Y2W1 955 aaKnown RBP22.14■■□□□ 1.14
SSBP3-216ENST00000610401 MYH1P12882 1939 aa22.14■■□□□ 1.14
SSBP3-216ENST00000610401 ROBO3Q96MS0 1386 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 F8VZ95 297 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 SPATA31C1P0DKV0 1188 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 TNFAIP3P21580 790 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 CDC25CP30307 473 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 IFI16Q16666 785 aaKnown RBP22.14■■□□□ 1.13
SSBP3-216ENST00000610401 SLFN13Q68D06 897 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 SYCP3Q8IZU3 236 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 CERS5Q8N5B7 392 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 BANK1Q8NDB2 785 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 GIMAP7Q8NHV1 300 aa22.14■■□□□ 1.13
SSBP3-216ENST00000610401 PRMT1Q99873 361 aaKnown RBP22.14■■□□□ 1.13
SSBP3-216ENST00000610401 ABCB11O95342 1321 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms