RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 ATF7P17544 494 aaPredicted RBP15.42■□□□□ 0.06
CTSA-218ENST00000607814 MGAT3Q09327 533 aa15.42■□□□□ 0.06
CTSA-218ENST00000607814 LPIN1Q14693 890 aa15.42■□□□□ 0.06
CTSA-218ENST00000607814 RUFY4Q6ZNE9 571 aa15.42■□□□□ 0.06
CTSA-218ENST00000607814 FAM43BQ6ZT52 329 aaPredicted RBP15.42■□□□□ 0.06
CTSA-218ENST00000607814 SPPL3Q8TCT6 385 aa15.42■□□□□ 0.06
CTSA-218ENST00000607814 TRAPPC12Q8WVT3 735 aa15.42■□□□□ 0.06
CTSA-218ENST00000607814 GTF3C6Q969F1 213 aa15.42■□□□□ 0.06
CTSA-218ENST00000607814 ZNF577Q9BSK1 485 aa15.42■□□□□ 0.06
CTSA-218ENST00000607814 FTHL17Q9BXU8 183 aa15.42■□□□□ 0.06
CTSA-218ENST00000607814 C22orf23Q9BZE7 217 aa15.42■□□□□ 0.06
CTSA-218ENST00000607814 FAM205CA6NFA0 338 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 M0R2N6 131 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 IPO5O00410 1097 aaKnown RBP15.41■□□□□ 0.06
CTSA-218ENST00000607814 TDP2O95551 362 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 ITGB1P05556 798 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 INF2Q27J81 1249 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 EARS2Q5JPH6 523 aaKnown RBP15.41■□□□□ 0.06
CTSA-218ENST00000607814 TSHZ1Q6ZSZ6 1077 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 CRIPAKQ8N1N5 446 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 NSUN7Q8NE18 718 aaKnown RBP15.41■□□□□ 0.06
CTSA-218ENST00000607814 LENG9Q96B70 501 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 PHF20Q9BVI0 1012 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 ERAP1Q9NZ08 941 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 USP15Q9Y4E8 981 aaPredicted RBP15.41■□□□□ 0.06
CTSA-218ENST00000607814 SQORQ9Y6N5 450 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 VPS13AQ96RL7 3174 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 CACNA1AO00555 2505 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 NFASCO94856 1347 aa15.41■□□□□ 0.06
CTSA-218ENST00000607814 PROB1E7EW31 1015 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 BACH1O14867 736 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 MSH4O15457 936 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 DNAJB1P25685 340 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 STAT5BP51692 787 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 PPFIA1Q13136 1202 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 PLCB4Q15147 1175 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 GRIK4Q16099 956 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 FBXO47Q5MNV8 452 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 SWSAP1Q6NVH7 229 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 NIPA1Q7RTP0 329 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 NPAS4Q8IUM7 802 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 CCDC83Q8IWF9 413 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 ASIC4Q96FT7 647 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 SMARCAD1Q9H4L7 1026 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 AZI2Q9H6S1 392 aa15.4■□□□□ 0.06
CTSA-218ENST00000607814 MRPL42Q9Y6G3 142 aaKnown RBP15.4■□□□□ 0.06
CTSA-218ENST00000607814 MBLAC1A4D2B0 266 aaPredicted RBP15.39■□□□□ 0.05
CTSA-218ENST00000607814 CHMP2AO43633 222 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 EIF5BO60841 1220 aaKnown RBP15.39■□□□□ 0.05
CTSA-218ENST00000607814 STAG3L1P0CL83 205 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 INSRRP14616 1297 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 AVPR2P30518 371 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 CIITAP33076 1130 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 NRIP1P48552 1158 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 UBE3AQ05086 875 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 NR5A1Q13285 461 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 MARCH8Q5T0T0 291 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 ABHD15Q6UXT9 468 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 CCDC60Q8IWA6 550 aaPredicted RBP15.39■□□□□ 0.05
CTSA-218ENST00000607814 TEX2Q8IWB9 1127 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 KLHL23Q8NBE8 558 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 POF1BQ8WVV4 589 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 SUSD6Q92537 303 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 ATOH1Q92858 354 aaPredicted RBP15.39■□□□□ 0.05
CTSA-218ENST00000607814 CDCA3Q99618 268 aaPredicted RBP15.39■□□□□ 0.05
CTSA-218ENST00000607814 TUBE1Q9UJT0 475 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 TRPC6Q9Y210 931 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 STK36Q9NRP7 1315 aa15.39■□□□□ 0.05
CTSA-218ENST00000607814 ATG7O95352 703 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 GLP2RO95838 553 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 ATP4AP20648 1035 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 GUCY1B3Q02153 619 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 TMEM62Q0P6H9 643 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 NONOQ15233 471 aaKnown RBP eCLIP15.38■□□□□ 0.05
CTSA-218ENST00000607814 PTPN21Q16825 1174 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 LETM2Q2VYF4 491 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 MCTP2Q6DN12 878 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 PIK3AP1Q6ZUJ8 805 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 ADGRD2Q7Z7M1 963 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 DAGLBQ8NCG7 672 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 FAM49AQ9H0Q0 323 aaPredicted RBP15.38■□□□□ 0.05
CTSA-218ENST00000607814 BARX2Q9UMQ3 279 aaPredicted RBP15.38■□□□□ 0.05
CTSA-218ENST00000607814 LIMCH1Q9UPQ0 1083 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 SAMM50Q9Y512 469 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 GVINP1Q7Z2Y8 2422 aa15.38■□□□□ 0.05
CTSA-218ENST00000607814 SLC37A4O43826 429 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 CSPG5O95196 566 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 USP11P51784 963 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 VCPP55072 806 aaKnown RBP15.37■□□□□ 0.05
CTSA-218ENST00000607814 IER5Q5VY09 327 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 PDE12Q6L8Q7 609 aaKnown RBP15.37■□□□□ 0.05
CTSA-218ENST00000607814 CKAP2LQ8IYA6 745 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 ATP8B4Q8TF62 1192 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 DNAJB3Q8WWF6 145 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 RPGRIP1Q96KN7 1286 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 TLE6Q9H808 572 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 ZNF302Q9NR11 478 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 CDY2AQ9Y6F7 541 aa15.37■□□□□ 0.05
CTSA-218ENST00000607814 IGKV6D-21A0A0A0MT36 114 aa15.36■□□□□ 0.05
CTSA-218ENST00000607814 CCDC194A0A1B0GVG4 234 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms