RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 FAM49AQ9H0Q0 323 aaPredicted RBP15.93■□□□□ 0.14
CTSA-211ENST00000606066 WNT8AQ9H1J5 351 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 TFIP11Q9UBB9 837 aaKnown RBP15.93■□□□□ 0.14
CTSA-211ENST00000606066 ZDHHC9Q9Y397 364 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 SRPRBQ9Y5M8 271 aaKnown RBP15.93■□□□□ 0.14
CTSA-211ENST00000606066 KDM3AQ9Y4C1 1321 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 SPTLC2O15270 562 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 PFKMP08237 780 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 CSF2RAP15509 400 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 MARCKSP29966 332 aaPredicted RBP15.92■□□□□ 0.14
CTSA-211ENST00000606066 ZNF618Q5T7W0 954 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 PLA2G4FQ68DD2 849 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 EFCAB12Q6NXP0 572 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 KRI1Q8N9T8 703 aaKnown RBP15.92■□□□□ 0.14
CTSA-211ENST00000606066 SYMPKQ92797 1274 aaKnown RBP15.92■□□□□ 0.14
CTSA-211ENST00000606066 ZBTB10Q96DT7 871 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 CDK5RAP3Q96JB5 506 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 RNPC3Q96LT9 517 aaKnown RBP15.92■□□□□ 0.14
CTSA-211ENST00000606066 MAP7D2Q96T17 732 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 NT5C3AQ9H0P0 336 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 SUGCTQ9HAC7 445 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 KIAA1024Q9UPX6 916 aa15.92■□□□□ 0.14
CTSA-211ENST00000606066 TMEM150BA6NC51 233 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 PP2D1A8MPX8 630 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 GAS2O43903 313 aaKnown RBP15.91■□□□□ 0.14
CTSA-211ENST00000606066 PPP6R2O75170 966 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 MAFO75444 373 aaPredicted RBP15.91■□□□□ 0.14
CTSA-211ENST00000606066 FOSL2P15408 326 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 CDC25AP30304 524 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 RARRES1P49788 294 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 POLGP54098 1239 aaPredicted RBP15.91■□□□□ 0.14
CTSA-211ENST00000606066 NPEPPSP55786 919 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 KRT85P78386 507 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 CDC42EP1Q00587 391 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 DNM1Q05193 864 aaKnown RBP15.91■□□□□ 0.14
CTSA-211ENST00000606066 FAM26DQ5JW98 314 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 POTEGQ6S5H5 508 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 CABP7Q86V35 215 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 KIAA0319LQ8IZA0 1049 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 KCNG4Q8TDN1 519 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 PIGOQ8TEQ8 1089 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 CALML4Q96GE6 196 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 SCLYQ96I15 445 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 CEP89Q96ST8 783 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 SH2D3AQ9BRG2 576 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 IL23AQ9NPF7 189 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 FBXO2Q9UK22 296 aaPredicted RBP15.91■□□□□ 0.14
CTSA-211ENST00000606066 DBR1Q9UK59 544 aaKnown RBP15.91■□□□□ 0.14
CTSA-211ENST00000606066 CIZ1Q9ULV3 898 aaPredicted RBP15.91■□□□□ 0.14
CTSA-211ENST00000606066 DNM3Q9UQ16 869 aa15.91■□□□□ 0.14
CTSA-211ENST00000606066 IGKV6-21A0A0C4DH24 114 aa15.9■□□□□ 0.14
CTSA-211ENST00000606066 DGAT1O75907 488 aa15.9■□□□□ 0.14
CTSA-211ENST00000606066 CTSHP09668 335 aa15.9■□□□□ 0.14
CTSA-211ENST00000606066 DDIT3P35638 169 aa15.9■□□□□ 0.14
CTSA-211ENST00000606066 TXLNAP40222 546 aa15.9■□□□□ 0.14
CTSA-211ENST00000606066 MRPS6P82932 125 aaKnown RBP15.9■□□□□ 0.14
CTSA-211ENST00000606066 ZRSR1Q15695 479 aaKnown RBP15.9■□□□□ 0.14
CTSA-211ENST00000606066 PSRC1Q6PGN9 363 aaPredicted RBP15.9■□□□□ 0.14
CTSA-211ENST00000606066 RASSF8Q8NHQ8 419 aa15.9■□□□□ 0.14
CTSA-211ENST00000606066 MMTAG2Q9BU76 263 aaKnown RBP15.9■□□□□ 0.14
CTSA-211ENST00000606066 CSRNP2Q9H175 543 aa15.9■□□□□ 0.14
CTSA-211ENST00000606066 PRDM6Q9NQX0 595 aa15.9■□□□□ 0.14
CTSA-211ENST00000606066 DDX19AQ9NUU7 478 aaKnown RBP15.9■□□□□ 0.14
CTSA-211ENST00000606066 AKT3Q9Y243 479 aa15.9■□□□□ 0.14
CTSA-211ENST00000606066 ARHGEF35A5YM69 484 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 ZBTB39O15060 712 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 NCLP19338 710 aaKnown RBP15.89■□□□□ 0.13
CTSA-211ENST00000606066 CLCN3P51790 818 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 GRIN2CQ14957 1233 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 HYIQ5T013 277 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 TRAF7Q6Q0C0 670 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 LRRC71Q8N4P6 559 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 LINC01465Q8N7H1 131 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 TCP11Q8WWU5 503 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 MTRQ99707 1265 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 CELF4Q9BZC1 486 aaKnown RBP15.89■□□□□ 0.13
CTSA-211ENST00000606066 CCSER1Q9C0I3 900 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 DHX33Q9H6R0 707 aaKnown RBP15.89■□□□□ 0.13
CTSA-211ENST00000606066 CCDC39Q9UFE4 941 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 RBM19Q9Y4C8 960 aaKnown RBP15.89■□□□□ 0.13
CTSA-211ENST00000606066 TRPV2Q9Y5S1 764 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 CDY2AQ9Y6F7 541 aa15.89■□□□□ 0.13
CTSA-211ENST00000606066 FGBP02675 491 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 CHRNA1P02708 482 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 ACTN1P12814 892 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 GRIN1Q05586 938 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 MGAT3Q09327 533 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 TMEM62Q0P6H9 643 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 EMC2Q15006 297 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 ECM1Q16610 540 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 DEFB128Q7Z7B8 93 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 ZNF579Q8NAF0 562 aaKnown RBP15.88■□□□□ 0.13
CTSA-211ENST00000606066 USP38Q8NB14 1042 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 CLIC6Q96NY7 704 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 SCAND2PQ9GZW5 306 aaPredicted RBP15.88■□□□□ 0.13
CTSA-211ENST00000606066 MTIF3Q9H2K0 278 aaKnown RBP15.88■□□□□ 0.13
CTSA-211ENST00000606066 ATP6V0A4Q9HBG4 840 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 SUCLA2Q9P2R7 463 aaPredicted RBP15.88■□□□□ 0.13
CTSA-211ENST00000606066 RCOR1Q9UKL0 485 aa15.88■□□□□ 0.13
CTSA-211ENST00000606066 SQORQ9Y6N5 450 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms