RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PUF60Q9UHX1 559 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-227ENST00000602011 NAP1L2Q9ULW6 460 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-227ENST00000602011 ZNF318Q5VUA4 2279 aa20.19■□□□□ 0.82
SHKBP1-227ENST00000602011 DDX39AO00148 427 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 PSMA5P28066 241 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 USP11P51784 963 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 PKN1Q16512 942 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 HERC4Q5GLZ8 1057 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 SPOUT1Q5T280 376 aaKnown RBP20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 RNF135Q8IUD6 432 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 MICAL1Q8TDZ2 1067 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 RSPH1Q8WYR4 309 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 MFSD14AQ96MC6 490 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 C22orf23Q9BZE7 217 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 TLE6Q9H808 572 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 LZTS1Q9Y250 596 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 PCDHGC5Q9Y5F6 944 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 TECTAO75443 2155 aa20.18■□□□□ 0.82
SHKBP1-227ENST00000602011 WDR64B1ANS9 1081 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 ZBTB42B2RXF5 422 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 C22orf31O95567 290 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 SRGAP2BP0DMP2 458 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 ATP4AP20648 1035 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 TMEM266Q2M3C6 531 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 BLOC1S2Q6QNY1 142 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 METTL13Q8N6R0 699 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 MAP7D2Q96T17 732 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 PHOX2BQ99453 314 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 RIT2Q99578 217 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 RNF26Q9BY78 433 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 KIAA1671Q9BY89 1806 aa20.17■□□□□ 0.82
SHKBP1-227ENST00000602011 CARNS1A5YM72 827 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 TBKBP1A7MCY6 615 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 ZSCAN20P17040 1043 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 LAG3P18627 525 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 SFNP31947 248 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 Q6ZUG5 572 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 FAM177A1Q8N128 213 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 SMRP1Q8NCR6 262 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 AGXT2Q9BYV1 514 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 CDHR5Q9HBB8 845 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 SH3GLB2Q9NR46 395 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 TLR9Q9NR96 1032 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 SAMM50Q9Y512 469 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 NID2Q14112 1375 aa20.16■□□□□ 0.82
SHKBP1-227ENST00000602011 EPB41L2O43491 1005 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 GPR32O75388 356 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 HSPA4P34932 840 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 NRIP1P48552 1158 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 PLCB3Q01970 1234 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 KIZQ2M2Z5 673 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 PRR16Q569H4 304 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 RBM23Q86U06 439 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 RDM1Q8NG50 284 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 TMEM40Q8WWA1 233 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 BRF1Q92994 677 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 TMEM117Q9H0C3 514 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 NGRNQ9NPE2 291 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 CLEC1BQ9P126 229 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 GABBR1Q9UBS5 961 aa20.15■□□□□ 0.82
SHKBP1-227ENST00000602011 MGEA5O60502 916 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 FGF18O76093 207 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 IFNAR1P17181 557 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 ATF7P17544 494 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 EIF4BP23588 611 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 PPM1AP35813 382 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 EVCP57679 992 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 APOBRQ0VD83 1088 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 DSC3Q14574 896 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 FAM102BQ5T8I3 360 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 EFCAB12Q6NXP0 572 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 TMEM184AQ6ZMB5 413 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 BMP8AQ7Z5Y6 402 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 FAM228AQ86W67 206 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 THNSL1Q8IYQ7 743 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 EDAQ92838 391 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 JAKMIP1Q96N16 626 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 OSMRQ99650 979 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 DISC1Q9NRI5 854 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 TYW1Q9NV66 732 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 LOXHD1Q8IVV2 1947 aa20.14■□□□□ 0.81
SHKBP1-227ENST00000602011 PPFIA3O75145 1194 aa20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 REC8O95072 547 aa20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 EOMESO95936 686 aa20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 JAK3P52333 1124 aa20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 RBM10P98175 930 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 KRT17Q04695 432 aa20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 CBX2Q14781 532 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 ABI1Q8IZP0 508 aa20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 RASGRP4Q8TDF6 673 aa20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 BARX2Q9UMQ3 279 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-227ENST00000602011 LOC730098B7Z3J9 87 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 GLP2RO95838 553 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 RPS6KB1P23443 525 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 NLRP11P59045 1033 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 BMS1Q14692 1282 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 NTRK3Q16288 839 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 DUSP6Q16828 381 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 IER5LQ5T953 404 aa20.12■□□□□ 0.81
SHKBP1-227ENST00000602011 COLGALT1Q8NBJ5 622 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms