RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 UBE3AQ05086 875 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 DUSP6Q16828 381 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 ADCK5Q3MIX3 580 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 ZNF484Q5JVG2 852 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 SUGP1Q8IWZ8 645 aaKnown RBP9.45□□□□□ -0.9
CCDC9-206ENST00000601154 LRRC71Q8N4P6 559 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 ZNF713Q8N859 430 aaPredicted RBP9.45□□□□□ -0.9
CCDC9-206ENST00000601154 TCF25Q9BQ70 676 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 ZNF577Q9BSK1 485 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
CCDC9-206ENST00000601154 TMEM161AQ9NX61 479 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 CDH22Q9UJ99 828 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 AKT3Q9Y243 479 aa9.45□□□□□ -0.9
CCDC9-206ENST00000601154 HIDE1A8MVS5 230 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 CPA1P15085 419 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 LAG3P18627 525 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 ADD1P35611 737 aaKnown RBP9.44□□□□□ -0.9
CCDC9-206ENST00000601154 TECP42680 631 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 CRYBB1P53674 252 aaPredicted RBP9.44□□□□□ -0.9
CCDC9-206ENST00000601154 NLRP11P59045 1033 aaKnown RBP9.44□□□□□ -0.9
CCDC9-206ENST00000601154 EXOSC10Q01780 885 aaKnown RBP9.44□□□□□ -0.9
CCDC9-206ENST00000601154 PRR16Q569H4 304 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 ODR4Q5SWX8 454 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 DHX32Q7L7V1 743 aaKnown RBP9.44□□□□□ -0.9
CCDC9-206ENST00000601154 NIPA1Q7RTP0 329 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 ZBTB33Q86T24 672 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 RASEFQ8IZ41 740 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 ABI1Q8IZP0 508 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 RASGRP4Q8TDF6 673 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 BBXQ8WY36 941 aaPredicted RBP9.44□□□□□ -0.9
CCDC9-206ENST00000601154 SCLT1Q96NL6 688 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 CWH43Q9H720 699 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 TSHZ2Q9NRE2 1034 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 FAM217BQ9NTX9 383 aaPredicted RBP9.44□□□□□ -0.9
CCDC9-206ENST00000601154 FAM86C1Q9NVL1 165 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 GABBR1Q9UBS5 961 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 SAMM50Q9Y512 469 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 KAT6AQ92794 2004 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 C5orf42Q9H799 3197 aa9.44□□□□□ -0.9
CCDC9-206ENST00000601154 FSCN2O14926 492 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 CHMP2AO43633 222 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 GPR32O75388 356 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 PSAPP07602 524 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 SRGAP2BP0DMP2 458 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 FGFR4P22455 802 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 METAP2P50579 478 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 PTPN5P54829 565 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 VCPP55072 806 aaKnown RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 SETQ01105 290 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 DSC3Q14574 896 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 CBX2Q14781 532 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 PFKFB3Q16875 520 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 ZNF746Q6NUN9 644 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 ANKRD54Q6NXT1 300 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 KCNT2Q6UVM3 1135 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 LRRC55Q6ZSA7 311 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 TMC7Q7Z402 723 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 BMP8AQ7Z5Y6 402 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 REXO1Q8N1G1 1221 aaKnown RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 LRRC43Q8N309 656 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 FBXL6Q8N531 539 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 SUSD6Q92537 303 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 MRPS27Q92552 414 aaKnown RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 ZNF558Q96NG5 402 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 CASD1Q96PB1 797 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 MAP7D2Q96T17 732 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 CDCA3Q99618 268 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 TMEM117Q9H0C3 514 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 GLT8D2Q9H1C3 349 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 C6orf50Q9HD87 102 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 TBC1D22BQ9NU19 505 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 RNF19AQ9NV58 838 aa9.43□□□□□ -0.9
CCDC9-206ENST00000601154 RNF216Q9NWF9 866 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 PUF60Q9UHX1 559 aaKnown RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 MAFBQ9Y5Q3 323 aaPredicted RBP9.43□□□□□ -0.9
CCDC9-206ENST00000601154 PLXNA4Q9HCM2 1894 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 TECTAO75443 2155 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 CSDE1O75534 798 aaKnown RBP9.42□□□□□ -0.9
CCDC9-206ENST00000601154 OATP04181 439 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 CYP3A4P08684 503 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 ZSCAN20P17040 1043 aaPredicted RBP9.42□□□□□ -0.9
CCDC9-206ENST00000601154 ATF7P17544 494 aaPredicted RBP9.42□□□□□ -0.9
CCDC9-206ENST00000601154 PRKCEQ02156 737 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 SIGLEC14Q08ET2 396 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 PTPN21Q16825 1174 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 EFCAB12Q6NXP0 572 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 SYCE2Q6PIF2 218 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 TEX2Q8IWB9 1127 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 SMAP1Q8IYB5 467 aaPredicted RBP9.42□□□□□ -0.9
CCDC9-206ENST00000601154 HELQQ8TDG4 1101 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 CRYGNQ8WXF5 182 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 PHKBQ93100 1093 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 GJA10Q969M2 543 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 S1PR5Q9H228 398 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 ELAC1Q9H777 363 aaKnown RBP9.42□□□□□ -0.9
CCDC9-206ENST00000601154 CEP131Q9UPN4 1083 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 PCDHA10Q9Y5I2 948 aa9.42□□□□□ -0.9
CCDC9-206ENST00000601154 ESYT2A0FGR8 921 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 FSD2A1L4K1 749 aa9.41□□□□□ -0.9
CCDC9-206ENST00000601154 WDR64B1ANS9 1081 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms