RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 FAM184BQ9ULE4 1060 aa12.6□□□□□ -0.39
ARHGEF1-220ENST00000600274 L1RE1Q9UN81 338 aa12.6□□□□□ -0.39
ARHGEF1-220ENST00000600274 USP20Q9Y2K6 914 aa12.6□□□□□ -0.39
ARHGEF1-220ENST00000600274 PITPNM2Q9BZ72 1349 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 PEX10O60683 326 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 VIL1P09327 827 aaKnown RBP12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 HLTFQ14527 1009 aaKnown RBP eCLIP12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 GLYCTKQ8IVS8 523 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 MSANTD4Q8NCY6 345 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 AP1M1Q9BXS5 423 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 PSMD10O75832 226 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 GCLMP48507 274 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 PEX3P56589 373 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 MTMR1Q13613 665 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 XKR9Q5GH70 373 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 NBPF12Q5TAG4 269 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 ZNF746Q6NUN9 644 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 DLK2Q6UY11 383 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 CREG2Q8IUH2 290 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 HSD17B14Q9BPX1 270 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 RASSF4Q9H2L5 321 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 CNTNAP1P78357 1384 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 PDXKO00764 312 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 SLC16A4O15374 487 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 TGFB1I1O43294 461 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 PSMC2P35998 433 aaKnown RBP12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 RPS6P62753 249 aaKnown RBP12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 SLC18A3Q16572 532 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 EDRF1Q3B7T1 1238 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 COBLL1Q53SF7 1204 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 KLHDC7AQ5VTJ3 777 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 ARHGEF16Q5VV41 709 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 TTC19Q6DKK2 380 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 CRYGNQ8WXF5 182 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 WNK4Q96J92 1243 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 RMDN3Q96TC7 470 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 TLR10Q9BXR5 811 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 TAOK3Q9H2K8 898 aa12.59□□□□□ -0.39
ARHGEF1-220ENST00000600274 MAP9Q49MG5 647 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 MOXD1Q6UVY6 613 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 BTNL9Q6UXG8 535 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 VPS36Q86VN1 386 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 RBM46Q8TBY0 533 aaKnown RBP12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 SLC35C1Q96A29 364 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 TRIM31Q9BZY9 425 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 COL11A2P13942 1736 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 FKBP1AP62942 108 aaKnown RBP12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 CBWD6Q4V339 395 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 CBWD3Q5JTY5 395 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 CBWD5Q5RIA9 395 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 MICALL2Q8IY33 904 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 PRPF38AQ8NAV1 312 aaKnown RBP12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 ATG4CQ96DT6 458 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 SAAL1Q96ER3 474 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 MBOAT7Q96N66 472 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 RUFY1Q96T51 708 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 POLR3CQ9BUI4 534 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 ACBD3Q9H3P7 528 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 RPAP3Q9H6T3 665 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 LCMT1Q9UIC8 334 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 DNAJC12Q9UKB3 198 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 KRT13P13646 458 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 TCP1P17987 556 aaKnown RBP12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 CIITAP33076 1130 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 BAG6P46379 1132 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 C1orf186Q6ZWK4 172 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 DAAM2Q86T65 1068 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 CAMKK2Q96RR4 588 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 MXRA8Q9BRK3 442 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 SELENOOQ9BVL4 669 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 GANQ9H2C0 597 aa12.58□□□□□ -0.4
ARHGEF1-220ENST00000600274 ANO9A1A5B4 782 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 STAT1P42224 750 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 HMGCS2P54868 508 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 TRAF1Q13077 416 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 DRAP1Q14919 205 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 RPS6KA1Q15418 735 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 CFAP221Q4G0U5 840 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 FRMD5Q7Z6J6 570 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 FAM160B2Q86V87 743 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 CBWD1Q9BRT8 395 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 RANBP17Q9H2T7 1088 aaKnown RBP12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 EPB41L5Q9HCM4 733 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 ACP6Q9NPH0 428 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 ATRNL1Q5VV63 1379 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 ATP9AO75110 1047 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 DLG4P78352 724 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 CDK17Q00537 523 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 DALRD3Q5D0E6 543 aaKnown RBP12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 MCTP2Q6DN12 878 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 PHLDB2Q86SQ0 1253 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 IQCDQ96DY2 449 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 WRNIP1Q96S55 665 aa12.57□□□□□ -0.4
ARHGEF1-220ENST00000600274 AGPAT3Q9NRZ7 376 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms