RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 LRRC57Q8N9N7 239 aa11.76□□□□□ -0.53
ZNF544-215ENST00000599953 TPCN2Q8NHX9 752 aa11.76□□□□□ -0.53
ZNF544-215ENST00000599953 WDR18Q9BV38 432 aa11.76□□□□□ -0.53
ZNF544-215ENST00000599953 CAPS2Q9BXY5 557 aa11.76□□□□□ -0.53
ZNF544-215ENST00000599953 TMEM59LQ9UK28 342 aa11.76□□□□□ -0.53
ZNF544-215ENST00000599953 SCN9AQ15858 1988 aa11.76□□□□□ -0.53
ZNF544-215ENST00000599953 CCDC188H7C350 402 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 RFX1P22670 979 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 CARSP49589 748 aaKnown RBP11.75□□□□□ -0.53
ZNF544-215ENST00000599953 ZNF131P52739 623 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 CUL1Q13616 776 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 AOC3Q16853 763 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 CEP55Q53EZ4 464 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 FAM160B2Q86V87 743 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 TSEN2Q8NCE0 465 aaKnown RBP11.75□□□□□ -0.53
ZNF544-215ENST00000599953 NEK9Q8TD19 979 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 BORCS6Q96GS4 357 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 TEKT3Q9BXF9 490 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 STK33Q9BYT3 514 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 FAM107BQ9H098 131 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 RANBP17Q9H2T7 1088 aaKnown RBP11.75□□□□□ -0.53
ZNF544-215ENST00000599953 SUCLA2Q9P2R7 463 aaPredicted RBP11.75□□□□□ -0.53
ZNF544-215ENST00000599953 NENFQ9UMX5 172 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 ZMYM2Q9UBW7 1377 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 SFI1A8K8P3 1242 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 TMCO5BA8MYB1 307 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 MYO1CO00159 1063 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 CEP104O60308 925 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 PLA2G6O60733 806 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 NMT1P30419 496 aaKnown RBP11.75□□□□□ -0.53
ZNF544-215ENST00000599953 SOX5P35711 763 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 FMO5P49326 533 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 IRX5P78411 483 aaPredicted RBP11.75□□□□□ -0.53
ZNF544-215ENST00000599953 ZNF720Q7Z2F6 126 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 PRMT6Q96LA8 375 aaPredicted RBP11.75□□□□□ -0.53
ZNF544-215ENST00000599953 CCDC43Q96MW1 224 aaKnown RBP11.75□□□□□ -0.53
ZNF544-215ENST00000599953 ZIM3Q96PE6 472 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.75□□□□□ -0.531e-8■■■■□ 22.6
ZNF544-215ENST00000599953 ZNF577Q9BSK1 485 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 TAF1DQ9H5J8 278 aaPredicted RBP11.75□□□□□ -0.53
ZNF544-215ENST00000599953 RSPH14Q9UHP6 348 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 SLX4Q8IY92 1834 aa11.75□□□□□ -0.53
ZNF544-215ENST00000599953 ZNF646O15015 1829 aaPredicted RBP11.74□□□□□ -0.53
ZNF544-215ENST00000599953 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 F8VZ95 297 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 RAD51CO43502 376 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 VIL1P09327 827 aaKnown RBP11.74□□□□□ -0.53
ZNF544-215ENST00000599953 TAL1P17542 331 aaPredicted RBP11.74□□□□□ -0.53
ZNF544-215ENST00000599953 JAG1P78504 1218 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 KCNA1Q09470 495 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 MYBPC2Q14324 1141 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 ODR4Q5SWX8 454 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 CCDC174Q6PII3 467 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 SLFN11Q7Z7L1 901 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 CD302Q8IX05 232 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 KLHL7Q8IXQ5 586 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 U2AF1L4Q8WU68 220 aaKnown RBP11.74□□□□□ -0.53
ZNF544-215ENST00000599953 SCFD2Q8WU76 684 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 CASKIN2Q8WXE0 1202 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 TRERF1Q96PN7 1200 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 ISCUQ9H1K1 167 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 ARHGEF35A5YM69 484 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 DDX3XO00571 662 aaKnown RBP eCLIP11.74□□□□□ -0.532e-20■■■■□ 26.3
ZNF544-215ENST00000599953 EVI5O60447 810 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 GUCY2CP25092 1073 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 ECE1P42892 770 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 IRAK1P51617 712 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 RNASE9P60153 205 aaKnown RBP11.74□□□□□ -0.53
ZNF544-215ENST00000599953 SKOR1P84550 965 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 ALCAMQ13740 583 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 DNAJC21Q5F1R6 531 aaKnown RBP11.74□□□□□ -0.53
ZNF544-215ENST00000599953 DAAM2Q86T65 1068 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 C1orf131Q8NDD1 294 aaKnown RBP11.74□□□□□ -0.53
ZNF544-215ENST00000599953 VTI1AQ96AJ9 217 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 LRRC45Q96CN5 670 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 RASSF4Q9H2L5 321 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 AGPAT3Q9NRZ7 376 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
ZNF544-215ENST00000599953 AMFRQ9UKV5 643 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 ZBTB21Q9ULJ3 1066 aa11.74□□□□□ -0.53
ZNF544-215ENST00000599953 DIS3Q9Y2L1 958 aaKnown RBP11.74□□□□□ -0.53
ZNF544-215ENST00000599953 ESYT3A0FGR9 886 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 GOLGA6L10A6NI86 522 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 PPIP5K2O43314 1243 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 CETN1Q12798 172 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 HLTFQ14527 1009 aaKnown RBP eCLIP11.73□□□□□ -0.53
ZNF544-215ENST00000599953 RRP1BQ14684 758 aaKnown RBP11.73□□□□□ -0.53
ZNF544-215ENST00000599953 TNIP1Q15025 636 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 CLUL1Q15846 466 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 ZC2HC1CQ53FD0 456 aaPredicted RBP11.73□□□□□ -0.53
ZNF544-215ENST00000599953 MSL1Q68DK7 614 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 SLC9A9Q8IVB4 645 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 SYCP3Q8IZU3 236 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 IQCKQ8N0W5 287 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 RASGEF1CQ8N431 466 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 CCDC26Q8TAB7 109 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 FAM151AQ8WW52 585 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 CTNNBL1Q8WYA6 563 aaPredicted RBP11.73□□□□□ -0.53
ZNF544-215ENST00000599953 RIT2Q99578 217 aa11.73□□□□□ -0.53
ZNF544-215ENST00000599953 SLITRK6Q9H5Y7 841 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms