RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 ZNF852Q6ZMS4 543 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 FAM160B2Q86V87 743 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 PLEKHM2Q8IWE5 1019 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 VPS52Q8N1B4 723 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 FAM181AQ8N9Y4 354 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 SLC22A17Q8WUG5 538 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 KCTD12Q96CX2 325 aaKnown RBP5.19□□□□□ -1.58
HERC3-213ENST00000598772 DDRGK1Q96HY6 314 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 DBNDD2Q9BQY9 259 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 OSBPL6Q9BZF3 934 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 BCL11AQ9H165 835 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 ARMT1Q9H993 441 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 AGO3Q9H9G7 860 aaKnown RBP5.19□□□□□ -1.58
HERC3-213ENST00000598772 MLXIPQ9HAP2 919 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 LMAN1LQ9HAT1 526 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 COPRSQ9NQ92 184 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 JADE2Q9NQC1 790 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 NYAP2Q9P242 653 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 DDX41Q9UJV9 622 aaKnown RBP5.19□□□□□ -1.58
HERC3-213ENST00000598772 MRPS17Q9Y2R5 130 aaKnown RBP5.19□□□□□ -1.58
HERC3-213ENST00000598772 CDY2AQ9Y6F7 541 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 NAV1Q8NEY1 1877 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 APC2O95996 2303 aa5.19□□□□□ -1.58
HERC3-213ENST00000598772 C2CD3Q4AC94 2353 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 DENND3A2RUS2 1198 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 SRGAP3O43295 1099 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 WISP1O95388 367 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 CCDC192P0DO97 292 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 PDE4AP27815 886 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 MPLP40238 635 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 RPS6P62753 249 aaKnown RBP5.18□□□□□ -1.58
HERC3-213ENST00000598772 ATP8B2P98198 1209 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 CREB5Q02930 508 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 PAK2Q13177 524 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 HTR4Q13639 388 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 STXBP2Q15833 593 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 TMEM266Q2M3C6 531 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 HSDL1Q3SXM5 330 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 C4orf17Q53FE4 359 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 FBXO47Q5MNV8 452 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 SLC9C2Q5TAH2 1124 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 C12orf60Q5U649 245 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 PARM1Q6UWI2 310 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 TSHZ1Q6ZSZ6 1077 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 C16orf86Q6ZW13 317 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 KBTBD6Q86V97 674 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 ABI1Q8IZP0 508 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 ZNF444Q8N0Y2 327 aaPredicted RBP5.18□□□□□ -1.58
HERC3-213ENST00000598772 LCORLQ8N3X6 602 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 ZNF513Q8N8E2 541 aaPredicted RBP5.18□□□□□ -1.58
HERC3-213ENST00000598772 RNF169Q8NCN4 708 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 PPTC7Q8NI37 304 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 DNAJB3Q8WWF6 145 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 SMG7Q92540 1137 aaKnown RBP5.18□□□□□ -1.58
HERC3-213ENST00000598772 PHKBQ93100 1093 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 CLDN23Q96B33 292 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 RIOK1Q9BRS2 568 aaKnown RBP5.18□□□□□ -1.58
HERC3-213ENST00000598772 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.18□□□□□ -1.58
HERC3-213ENST00000598772 FTHL17Q9BXU8 183 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 FAM49AQ9H0Q0 323 aaPredicted RBP5.18□□□□□ -1.58
HERC3-213ENST00000598772 SLC32A1Q9H598 525 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 ANTXR1Q9H6X2 564 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 CWH43Q9H720 699 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 EHMT1Q9H9B1 1298 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 ATP6V0A4Q9HBG4 840 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 VPS45Q9NRW7 570 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 TCP11L1Q9NUJ3 509 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 EPS15L1Q9UBC2 864 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 PRR12Q9ULL5 1215 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 PADI3Q9ULW8 664 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 GINS2Q9Y248 185 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 CLUHO75153 1309 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 FANCIQ9NVI1 1328 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 CELSR3Q9NYQ7 3312 aa5.18□□□□□ -1.58
HERC3-213ENST00000598772 CACNA1EQ15878 2313 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 LOC102724159A0A0B4J2E5 919 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 ZNF316A6NFI3 1004 aaPredicted RBP5.17□□□□□ -1.58
HERC3-213ENST00000598772 MINDY4BA8MYZ0 360 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 NOP56O00567 594 aaKnown RBP5.17□□□□□ -1.58
HERC3-213ENST00000598772 LILRB3O75022 631 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 GGPS1O95749 300 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 SPATA31D3P0C874 917 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 MYCLP12524 364 aaPredicted RBP5.17□□□□□ -1.58
HERC3-213ENST00000598772 TDGF1P13385 188 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 HOXC13P31276 330 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 CNR2P34972 360 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 PPM1AP35813 382 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 SLC16A2P36021 539 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 CCR10P46092 362 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 RPS9P46781 194 aaKnown RBP5.17□□□□□ -1.58
HERC3-213ENST00000598772 PXNP49023 591 aaPredicted RBP5.17□□□□□ -1.58
HERC3-213ENST00000598772 SARSP49591 514 aaKnown RBP5.17□□□□□ -1.58
HERC3-213ENST00000598772 IGBP1P78318 339 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 PFKPQ01813 784 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 PWP2Q15269 919 aaKnown RBP5.17□□□□□ -1.58
HERC3-213ENST00000598772 CCDC96Q2M329 555 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 TAF1BQ53T94 588 aaPredicted RBP5.17□□□□□ -1.58
HERC3-213ENST00000598772 SPATA31D4Q6ZUB0 917 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 CACNA2D4Q7Z3S7 1137 aa5.17□□□□□ -1.58
HERC3-213ENST00000598772 PPFIBP1Q86W92 1011 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms