RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 PI4K2AQ9BTU6 479 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
USHBP1-207ENST00000597928 AKAP11Q9UKA4 1901 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 PHF20L1A8MW92 1017 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 GCFC2P16383 781 aaKnown RBP13.46□□□□□ -0.25
USHBP1-207ENST00000597928 ALDH1B1P30837 517 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 SLC35G2Q8TBE7 412 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 PPM1EQ8WY54 764 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 HAUS1Q96CS2 278 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 TMEM39BQ9GZU3 492 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 KLHL11Q9NVR0 708 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 TAS2R14Q9NYV8 317 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 SWAP70Q9UH65 585 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 NAGPAQ9UK23 515 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 FTLP02792 175 aaPredicted RBP13.46□□□□□ -0.25
USHBP1-207ENST00000597928 ACTN3Q08043 901 aaPredicted RBP13.46□□□□□ -0.25
USHBP1-207ENST00000597928 SLC20A1Q8WUM9 679 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 KAT5Q92993 513 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 PPP1R16BQ96T49 567 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 LXNQ9BS40 222 aa13.46□□□□□ -0.25
USHBP1-207ENST00000597928 EMSYQ7Z589 1322 aa13.46□□□□□ -0.26
USHBP1-207ENST00000597928 ANKRD62A6NC57 917 aa13.46□□□□□ -0.26
USHBP1-207ENST00000597928 TNNI1P19237 187 aa13.46□□□□□ -0.26
USHBP1-207ENST00000597928 FGFR4P22455 802 aa13.46□□□□□ -0.26
USHBP1-207ENST00000597928 HDLBPQ00341 1268 aaKnown RBP13.46□□□□□ -0.26
USHBP1-207ENST00000597928 ARSHQ5FYA8 562 aa13.46□□□□□ -0.26
USHBP1-207ENST00000597928 DAB2IPQ5VWQ8 1189 aa13.46□□□□□ -0.26
USHBP1-207ENST00000597928 APOBEC3HQ6NTF7 200 aaKnown RBP13.46□□□□□ -0.26
USHBP1-207ENST00000597928 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.26
USHBP1-207ENST00000597928 GLIS2Q9BZE0 524 aaPredicted RBP13.46□□□□□ -0.26
USHBP1-207ENST00000597928 THAP2Q9H0W7 228 aa13.46□□□□□ -0.26
USHBP1-207ENST00000597928 NUCKS1Q9H1E3 243 aaKnown RBP13.46□□□□□ -0.26
USHBP1-207ENST00000597928 IFNB1P01574 187 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 NAB2Q15742 525 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 TTMPQ5BVD1 217 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 CYFIP1Q7L576 1253 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 GDAP1Q8TB36 358 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 C1orf54Q8WWF1 131 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 ZNF341Q9BYN7 854 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 DAAM1Q9Y4D1 1078 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 M0R2N6 131 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 CTNND1O60716 968 aaKnown RBP13.45□□□□□ -0.26
USHBP1-207ENST00000597928 FLT3P36888 993 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 SEL1L2Q5TEA6 688 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 EMBQ6PCB8 327 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 LRRC45Q96CN5 670 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 TTYH3Q9C0H2 523 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 TSKSQ9UJT2 592 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 FOXN3O00409 490 aaPredicted RBP13.45□□□□□ -0.26
USHBP1-207ENST00000597928 CYP26A1O43174 497 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 HIP1RO75146 1068 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 FAM133BQ5BKY9 247 aaKnown RBP13.45□□□□□ -0.26
USHBP1-207ENST00000597928 SYCP2LQ5T4T6 812 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 CYP4F22Q6NT55 531 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 BARGINQ6ZT62 677 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 TRIM59Q8IWR1 403 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 RPUSD2Q8IZ73 545 aaKnown RBP13.45□□□□□ -0.26
USHBP1-207ENST00000597928 ZNF653Q96CK0 615 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 ANKFY1Q9P2R3 1169 aa13.45□□□□□ -0.26
USHBP1-207ENST00000597928 AJAP1Q9UKB5 411 aaPredicted RBP13.45□□□□□ -0.26
USHBP1-207ENST00000597928 AGPSO00116 658 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 IPO5O00410 1097 aaKnown RBP13.44□□□□□ -0.26
USHBP1-207ENST00000597928 NOL4O94818 638 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 SEZ6Q53EL9 994 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
USHBP1-207ENST00000597928 POMGNT1Q8WZA1 660 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 BAIAP2L1Q9UHR4 511 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-207ENST00000597928 TRPM3Q9HCF6 1732 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-207ENST00000597928 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 RGS16O15492 202 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-207ENST00000597928 PDE6BP35913 854 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 OSTNP61366 133 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 ERVK-9P63128 1117 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 UAP1Q16222 522 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-207ENST00000597928 DENND2CQ68D51 928 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 RINT1Q6NUQ1 792 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 PROM2Q8N271 834 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 FAM53CQ9NYF3 392 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 STK38LQ9Y2H1 464 aa13.44□□□□□ -0.26
USHBP1-207ENST00000597928 CTNNA2P26232 953 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 DR1Q01658 176 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 CALCOCO2Q13137 446 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 SF3B2Q13435 895 aaKnown RBP13.43□□□□□ -0.26
USHBP1-207ENST00000597928 TMEM179Q6ZVK1 233 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 KRT27Q7Z3Y8 459 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 USP38Q8NB14 1042 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 CBWD1Q9BRT8 395 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 TACO1Q9BSH4 297 aaKnown RBP13.43□□□□□ -0.26
USHBP1-207ENST00000597928 TEKT3Q9BXF9 490 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 SLIT2O94813 1529 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 A0A1W2PRG0 241 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 FOXO6A8MYZ6 492 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 DLG4P78352 724 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 VPS72Q15906 364 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 CBWD6Q4V339 395 aa13.43□□□□□ -0.26
USHBP1-207ENST00000597928 CBWD3Q5JTY5 395 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms