RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 NPEPPSP55786 919 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 CYP4A11Q02928 519 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 CTTNQ14247 550 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 KIZQ2M2Z5 673 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 TTC38Q5R3I4 469 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 C4orf32Q8N8J7 132 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 MYLIPQ8WY64 445 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 DYDC2Q96IM9 177 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 HSD17B14Q9BPX1 270 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 EIF2AK1Q9BQI3 630 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 PCDHA12Q9UN75 941 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 NOC2LQ9Y3T9 749 aaKnown RBP12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 SQORQ9Y6N5 450 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 MYO7AQ13402 2215 aa12.33□□□□□ -0.44
SHKBP1-206ENST00000595523 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 M0QZ92 97 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 TLL1O43897 1013 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 SLITRK3O94933 977 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 AMHP03971 560 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 TAP1Q03518 808 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 TBC1D8BQ0IIM8 1120 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 ORC2Q13416 577 aaPredicted RBP12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 GNL2Q13823 731 aaKnown RBP12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 TMEM266Q2M3C6 531 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 PPP2R2DQ66LE6 453 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 FAM117BQ6P1L5 589 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 RTN4RL1Q86UN2 441 aaPredicted RBP12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 C4orf19Q8IY42 314 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 MYOCDQ8IZQ8 938 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 OSMRQ99650 979 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 ADAMTS10Q9H324 1103 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 TMX1Q9H3N1 280 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 SUGCTQ9HAC7 445 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 SLC28A3Q9HAS3 691 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 CYP26B1Q9NR63 512 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 PADI3Q9ULW8 664 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 SMC3Q9UQE7 1217 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 STXBP5LQ9Y2K9 1186 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 KIF3AQ9Y496 699 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 PCDHB6Q9Y5E3 794 aa12.32□□□□□ -0.44
SHKBP1-206ENST00000595523 EPOPA6NHQ4 379 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 ENPP3O14638 875 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 MAFO75444 373 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 OR52Z1P0C646 297 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 CRYBB1P53674 252 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 HTRA4P83105 476 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 CRIPAKQ8N1N5 446 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 USP38Q8NB14 1042 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 TOP1MTQ969P6 601 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 ZNF668Q96K58 619 aaPredicted RBP12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 PRDM12Q9H4Q4 367 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 ZSWIM4Q9H7M6 989 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 ERVK-5Q9HDB9 667 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 AKT3Q9Y243 479 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 CUL9Q8IWT3 2517 aa12.31□□□□□ -0.44
SHKBP1-206ENST00000595523 MYH11P35749 1972 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 XIRP2A4UGR9 3374 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 VCANP13611 3396 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 MGEA5O60502 916 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 LYPLA2O95372 231 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 SPATA31C1P0DKV0 1188 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 YWHABP31946 246 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 TECP42680 631 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 GPC3P51654 580 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 NLRP11P59045 1033 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 PAK2Q13177 524 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 MCTP1Q6DN14 999 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 FAM228AQ86W67 206 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 TPH2Q8IWU9 490 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 MAP7D2Q96T17 732 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 RAD9AQ99638 391 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 DHX33Q9H6R0 707 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 RC3H2Q9HBD1 1191 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
SHKBP1-206ENST00000595523 LINC01553A4QN01 128 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 H3BQV1 296 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 K7ELQ4 463 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 DKC1O60832 514 aaKnown RBP eCLIP12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 MED24O75448 989 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 RPS6KA5O75582 802 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 UPP2O95045 317 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 TMOD1P28289 359 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 PTGDRQ13258 359 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 IL17AQ16552 155 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 LARP1BQ659C4 914 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 CATSPER3Q86XQ3 398 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 NEK9Q8TD19 979 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 CEP170P1Q96L14 293 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 CERS4Q9HA82 394 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 XPNPEP1Q9NQW7 623 aa12.29□□□□□ -0.44
SHKBP1-206ENST00000595523 BMP2KQ9NSY1 1161 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms