RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 GRIN1Q05586 938 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 SF3A1Q15459 793 aaKnown RBP17.2■□□□□ 0.34
USE1-206ENST00000595101 IER5Q5VY09 327 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 POTEGQ6S5H5 508 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 NME8Q8N427 588 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 OSMRQ99650 979 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 PBX4Q9BYU1 374 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
USE1-206ENST00000595101 LRWD1Q9UFC0 647 aa17.2■□□□□ 0.34
USE1-206ENST00000595101 CHD7Q9P2D1 2997 aa17.19■□□□□ 0.34
USE1-206ENST00000595101 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.19■□□□□ 0.34
USE1-206ENST00000595101 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.19■□□□□ 0.34
USE1-206ENST00000595101 MAFO75444 373 aaPredicted RBP17.19■□□□□ 0.34
USE1-206ENST00000595101 CSDE1O75534 798 aaKnown RBP17.19■□□□□ 0.34
USE1-206ENST00000595101 LYPLA2O95372 231 aa17.19■□□□□ 0.34
USE1-206ENST00000595101 NLRP11P59045 1033 aaKnown RBP17.19■□□□□ 0.34
USE1-206ENST00000595101 CEBPZQ03701 1054 aaKnown RBP17.19■□□□□ 0.34
USE1-206ENST00000595101 XKR9Q5GH70 373 aa17.19■□□□□ 0.34
USE1-206ENST00000595101 KSR1Q8IVT5 923 aa17.19■□□□□ 0.34
USE1-206ENST00000595101 ADAMTS10Q9H324 1103 aa17.19■□□□□ 0.34
USE1-206ENST00000595101 EYSQ5T1H1 3165 aa17.18■□□□□ 0.34
USE1-206ENST00000595101 VWA3AA6NCI4 1184 aa17.18■□□□□ 0.34
USE1-206ENST00000595101 ACTN1P12814 892 aa17.18■□□□□ 0.34
USE1-206ENST00000595101 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
USE1-206ENST00000595101 IKBKEQ14164 716 aa17.18■□□□□ 0.34
USE1-206ENST00000595101 DTHD1Q6ZMT9 781 aa17.18■□□□□ 0.34
USE1-206ENST00000595101 TMEM143Q96AN5 459 aa17.18■□□□□ 0.34
USE1-206ENST00000595101 MMTAG2Q9BU76 263 aaKnown RBP17.18■□□□□ 0.34
USE1-206ENST00000595101 DHX33Q9H6R0 707 aaKnown RBP17.18■□□□□ 0.34
USE1-206ENST00000595101 NOC2LQ9Y3T9 749 aaKnown RBP17.18■□□□□ 0.34
USE1-206ENST00000595101 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 M0QZ92 97 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 DKC1O60832 514 aaKnown RBP eCLIP17.17■□□□□ 0.34
USE1-206ENST00000595101 RPA1P27694 616 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 PRPHP41219 470 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 SMAD3P84022 425 aaKnown RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 PDIA5Q14554 519 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 TSHZ1Q6ZSZ6 1077 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 SEPT8Q92599 483 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 FAM161BQ96MY7 647 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 POLR3CQ9BUI4 534 aaPredicted RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 XPNPEP1Q9NQW7 623 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 PADI3Q9ULW8 664 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 YBX2Q9Y2T7 364 aaKnown RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 SIP14410 1827 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 EVPLQ92817 2033 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 KDM3AQ9Y4C1 1321 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 LAD1O00515 517 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 BAIAP3O94812 1187 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 TMOD1P28289 359 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 CCT6AP40227 531 aaKnown RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 RARRES1P49788 294 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 FOXD4L6Q3SYB3 417 aaPredicted RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 FAM117BQ6P1L5 589 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 FOXD4L3Q6VB84 417 aaPredicted RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 OTUD6AQ7L8S5 288 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 RTN4RL1Q86UN2 441 aaPredicted RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 NEK9Q8TD19 979 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 LINC01599Q8WXQ3 324 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 MTIF3Q9H2K0 278 aaKnown RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 TMX1Q9H3N1 280 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 TUFT1Q9NNX1 390 aa17.17■□□□□ 0.34
USE1-206ENST00000595101 SUCLA2Q9P2R7 463 aaPredicted RBP17.17■□□□□ 0.34
USE1-206ENST00000595101 ABHD14A-ACY1A0A1B0GW23 586 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 FGFR4P22455 802 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 DNAJB2P25686 324 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 GPC3P51654 580 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 POLGP54098 1239 aaPredicted RBP17.16■□□□□ 0.34
USE1-206ENST00000595101 PTPAQ15257 358 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 SNX29Q8TEQ0 813 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 USP28Q96RU2 1077 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 MAP7D2Q96T17 732 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 POLD4Q9HCU8 107 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 KIAA1024Q9UPX6 916 aa17.16■□□□□ 0.34
USE1-206ENST00000595101 COL6A3P12111 3177 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 ARHGEF15O94989 841 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
USE1-206ENST00000595101 CRYBB1P53674 252 aaPredicted RBP17.15■□□□□ 0.34
USE1-206ENST00000595101 NFX1Q12986 1120 aaKnown RBP17.15■□□□□ 0.34
USE1-206ENST00000595101 EMC2Q15006 297 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 MAEAQ7L5Y9 396 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 KCNK18Q7Z418 384 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 FAM228AQ86W67 206 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 RHPN2Q8IUC4 686 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 MYOCDQ8IZQ8 938 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 ERMNQ8TAM6 284 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 SLC7A3Q8WY07 619 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 PLIN2Q99541 437 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 TTYH1Q9H313 450 aaPredicted RBP17.15■□□□□ 0.34
USE1-206ENST00000595101 ANKEF1Q9NU02 776 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 MGEA5O60502 916 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 RPLP2P05387 115 aaKnown RBP17.15■□□□□ 0.34
USE1-206ENST00000595101 KCNJ6P48051 423 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 ZRSR1Q15695 479 aaKnown RBP17.15■□□□□ 0.34
USE1-206ENST00000595101 SPRED2Q7Z698 418 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 HERC6Q8IVU3 1022 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 PRPF31Q8WWY3 499 aaKnown RBP17.15■□□□□ 0.34
USE1-206ENST00000595101 GPRC5CQ9NQ84 441 aa17.15■□□□□ 0.34
USE1-206ENST00000595101 DDX19AQ9NUU7 478 aaKnown RBP17.15■□□□□ 0.34
USE1-206ENST00000595101 ST3GAL5Q9UNP4 418 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms