RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 RABGAP1Q9Y3P9 1069 aa17.98■□□□□ 0.47
LIG1-206ENST00000594067 ATAD5Q96QE3 1844 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 HMGB1P1B2RPK0 211 aaPredicted RBP17.97■□□□□ 0.47
LIG1-206ENST00000594067 CTTNQ14247 550 aaKnown RBP17.97■□□□□ 0.47
LIG1-206ENST00000594067 BMT2Q1RMZ1 405 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 NLRP14Q86W24 1093 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 FAM198AQ9UFP1 575 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 THSD7AQ9UPZ6 1657 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 PGRMC1O00264 195 aaKnown RBP17.97■□□□□ 0.47
LIG1-206ENST00000594067 SART1O43290 800 aaKnown RBP17.97■□□□□ 0.47
LIG1-206ENST00000594067 TGFB1I1O43294 461 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 NDUFB10O96000 172 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 ZBTB48P10074 688 aaPredicted RBP17.97■□□□□ 0.47
LIG1-206ENST00000594067 ITGA4P13612 1032 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 NMT1P30419 496 aaKnown RBP17.97■□□□□ 0.47
LIG1-206ENST00000594067 GSCP56915 257 aaPredicted RBP17.97■□□□□ 0.47
LIG1-206ENST00000594067 PPARDQ03181 441 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 MICALCLQ6ZW33 695 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 MYCBPQ99417 103 aaPredicted RBP17.97■□□□□ 0.47
LIG1-206ENST00000594067 CENPHQ9H3R5 247 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 NENFQ9UMX5 172 aa17.97■□□□□ 0.47
LIG1-206ENST00000594067 H0YHG0 523 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 SLC16A3O15427 465 aaKnown RBP17.96■□□□□ 0.47
LIG1-206ENST00000594067 SYDE2Q5VT97 1194 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 RINT1Q6NUQ1 792 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 CCDC91Q7Z6B0 441 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 VPS36Q86VN1 386 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 KSR1Q8IVT5 923 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 OR2W6PQ8NHA6 318 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 CABS1Q96KC9 395 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.96■□□□□ 0.472e-7■■■■□ 19.9
LIG1-206ENST00000594067 NEUROG2Q9H2A3 272 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 PI4KBQ9UBF8 816 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 KRIT1O00522 736 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 OPLAHO14841 1288 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 EYA4O95677 639 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 HSD17B3P37058 310 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 HDLBPQ00341 1268 aaKnown RBP17.96■□□□□ 0.47
LIG1-206ENST00000594067 ZC2HC1CQ53FD0 456 aaPredicted RBP17.96■□□□□ 0.47
LIG1-206ENST00000594067 DAAM2Q86T65 1068 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 TMBIM4Q9HC24 238 aa17.96■□□□□ 0.47
LIG1-206ENST00000594067 ZBTB39O15060 712 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 CHMP2AO43633 222 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 FAM107AO95990 144 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 FOSP01100 380 aaPredicted RBP17.95■□□□□ 0.46
LIG1-206ENST00000594067 MYCT1Q8N699 235 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 ZDHHC15Q96MV8 337 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 GALCP54803 685 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 COG2Q14746 738 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 TPH2Q8IWU9 490 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 FAM186BQ8IYM0 893 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 LNX1Q8TBB1 728 aaPredicted RBP17.95■□□□□ 0.46
LIG1-206ENST00000594067 POLR3CQ9BUI4 534 aaPredicted RBP17.95■□□□□ 0.46
LIG1-206ENST00000594067 AMACRQ9UHK6 382 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 FBXL5Q9UKA1 691 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 STXBP5LQ9Y2K9 1186 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 QSER1Q2KHR3 1735 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 UBR3Q6ZT12 1888 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 LRRC37AA6NMS7 1700 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 LOC102724159A0A0B4J2E5 919 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 SRRM3A6NNA2 597 aaPredicted RBP17.95■□□□□ 0.46
LIG1-206ENST00000594067 EVI5O60447 810 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 FAM13AO94988 1023 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 HPDP32754 393 aaPredicted RBP17.95■□□□□ 0.46
LIG1-206ENST00000594067 CIITAP33076 1130 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 CUL1Q13616 776 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 PWP2Q15269 919 aaKnown RBP17.95■□□□□ 0.46
LIG1-206ENST00000594067 UAP1Q16222 522 aaPredicted RBP17.95■□□□□ 0.46
LIG1-206ENST00000594067 C6orf89Q6UWU4 347 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 SLFN11Q7Z7L1 901 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 LMBR1Q8WVP7 490 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 OSGEPQ9NPF4 335 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 GGA2Q9UJY4 613 aa17.95■□□□□ 0.46
LIG1-206ENST00000594067 H0YGN5 161 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 FERP16591 822 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 FLT3P36888 993 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 STAT1P42224 750 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 JAG1P78504 1218 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 ABCB5Q2M3G0 1257 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 TMEM179Q6ZVK1 233 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 NT5DC3Q86UY8 548 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 GLYCTKQ8IVS8 523 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 SPICE1Q8N0Z3 855 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.94■□□□□ 0.46
LIG1-206ENST00000594067 BORCS6Q96GS4 357 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 GJD4Q96KN9 370 aaPredicted RBP17.94■□□□□ 0.46
LIG1-206ENST00000594067 CALR3Q96L12 384 aaKnown RBP17.94■□□□□ 0.46
LIG1-206ENST00000594067 NFS1Q9Y697 457 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 ZMYM2Q9UBW7 1377 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 E7EVH7 732 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 TATDN1Q6P1N9 297 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 LRIG3Q6UXM1 1119 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 EIF1ADQ8N9N8 165 aaKnown RBP17.94■□□□□ 0.46
LIG1-206ENST00000594067 DYDC2Q96IM9 177 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 SUCLA2Q9P2R7 463 aaPredicted RBP17.94■□□□□ 0.46
LIG1-206ENST00000594067 STK24Q9Y6E0 443 aa17.94■□□□□ 0.46
LIG1-206ENST00000594067 DAPK3O43293 454 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 BMP3P12645 472 aa17.93■□□□□ 0.46
LIG1-206ENST00000594067 PSMC2P35998 433 aaKnown RBP17.93■□□□□ 0.46
LIG1-206ENST00000594067 MMP14P50281 582 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms