RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 COLGALT1Q8NBJ5 622 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 VN1R2Q8NFZ6 395 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 RASGRP4Q8TDF6 673 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 FBXL18Q96ME1 805 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 CWH43Q9H720 699 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 TLR9Q9NR96 1032 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 TBC1D22BQ9NU19 505 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 TYW1Q9NV66 732 aaKnown RBP18.55■□□□□ 0.56
LIG1-205ENST00000593425 GABBR1Q9UBS5 961 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 NID2Q14112 1375 aa18.55■□□□□ 0.56
LIG1-205ENST00000593425 CDC45O75419 566 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 FGF18O76093 207 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 ERVFC1P60507 584 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 UBE3AQ05086 875 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 SMAP1Q8IYB5 467 aaPredicted RBP18.54■□□□□ 0.56
LIG1-205ENST00000593425 METTL13Q8N6R0 699 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 MICAL1Q8TDZ2 1067 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 BRF1Q92994 677 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 LENG9Q96B70 501 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 TLE6Q9H808 572 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 C6orf50Q9HD87 102 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 AAASQ9NRG9 546 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 TMEM161AQ9NX61 479 aa18.54■□□□□ 0.56
LIG1-205ENST00000593425 USP15Q9Y4E8 981 aaPredicted RBP18.54■□□□□ 0.56
LIG1-205ENST00000593425 LOC730098B7Z3J9 87 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 PSAPP07602 524 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 HMGB1P09429 215 aaKnown RBP18.53■□□□□ 0.56
LIG1-205ENST00000593425 FAM189BP81408 668 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 FGD1P98174 961 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 PRR16Q569H4 304 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 FAM43BQ6ZT52 329 aaPredicted RBP18.53■□□□□ 0.56
LIG1-205ENST00000593425 THNSL1Q8IYQ7 743 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 LINC01465Q8N7H1 131 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 PHKBQ93100 1093 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 ATP6V0A4Q9HBG4 840 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 RNF19AQ9NV58 838 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
LIG1-205ENST00000593425 PCDHA10Q9Y5I2 948 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 MUC6Q6W4X9 2439 aa18.53■□□□□ 0.56
LIG1-205ENST00000593425 TECTAO75443 2155 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 ZNF318Q5VUA4 2279 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 CCDC196A0A1B0GTZ2 297 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 FSCN2O14926 492 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 PRPF3O43395 683 aaKnown RBP18.52■□□□□ 0.56
LIG1-205ENST00000593425 EDIL3O43854 480 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 NHLH1Q02575 133 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 DUSP6Q16828 381 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 LRRC71Q8N4P6 559 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 CCDC12Q8WUD4 166 aaPredicted RBP18.52■□□□□ 0.56
LIG1-205ENST00000593425 EDAQ92838 391 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 KCNB2Q92953 911 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 JAKMIP1Q96N16 626 aaKnown RBP18.52■□□□□ 0.56
LIG1-205ENST00000593425 ELAC1Q9H777 363 aaKnown RBP18.52■□□□□ 0.56
LIG1-205ENST00000593425 CEP131Q9UPN4 1083 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 SAMM50Q9Y512 469 aa18.52■□□□□ 0.56
LIG1-205ENST00000593425 ZNF862O60290 1169 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 LAG3P18627 525 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 CIITAP33076 1130 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 NLRP11P59045 1033 aaKnown RBP18.51■□□□□ 0.55
LIG1-205ENST00000593425 CBX2Q14781 532 aaPredicted RBP18.51■□□□□ 0.55
LIG1-205ENST00000593425 NTRK3Q16288 839 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 PLPP4Q5VZY2 271 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 MCTP2Q6DN12 878 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 EFCAB12Q6NXP0 572 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 LRRC55Q6ZSA7 311 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 CENPQQ7L2Z9 268 aaPredicted RBP18.51■□□□□ 0.55
LIG1-205ENST00000593425 ZNF668Q96K58 619 aaPredicted RBP18.51■□□□□ 0.55
LIG1-205ENST00000593425 CASD1Q96PB1 797 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 TMEM117Q9H0C3 514 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 ADAMTS10Q9H324 1103 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 TCEAL9Q9UHQ7 104 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 AKT3Q9Y243 479 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 SNX14Q9Y5W7 946 aa18.51■□□□□ 0.55
LIG1-205ENST00000593425 KMT2EQ8IZD2 1858 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 MAGEB2O15479 319 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 GNA11P29992 359 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 PBX3P40426 434 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 UGCGQ16739 394 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 SUSD6Q92537 303 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 MRPS27Q92552 414 aaKnown RBP18.5■□□□□ 0.55
LIG1-205ENST00000593425 FAM167AQ96KS9 214 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 MAP7D2Q96T17 732 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 PHF7Q9BWX1 381 aaPredicted RBP18.5■□□□□ 0.55
LIG1-205ENST00000593425 KCNH6Q9H252 994 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 VPS54Q9P1Q0 977 aa18.5■□□□□ 0.55
LIG1-205ENST00000593425 WDR64B1ANS9 1081 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 MSH4O15457 936 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 OATP04181 439 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 HSPA4P34932 840 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 MRE11P49959 708 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 PLCB3Q01970 1234 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 PRKCEQ02156 737 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 KCNC3Q14003 757 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 BLOC1S2Q6QNY1 142 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 GJA10Q969M2 543 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 RPGRIP1Q96KN7 1286 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 MFSD14AQ96MC6 490 aa18.49■□□□□ 0.55
LIG1-205ENST00000593425 CDCA3Q99618 268 aaPredicted RBP18.49■□□□□ 0.55
LIG1-205ENST00000593425 RNF26Q9BY78 433 aaPredicted RBP18.49■□□□□ 0.55
LIG1-205ENST00000593425 AGXT2Q9BYV1 514 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms