RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 RFC2P35250 354 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 DNM2P50570 870 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 MRPS6P82932 125 aaKnown RBP16.65■□□□□ 0.26
DDX39A-221ENST00000593026 HABP4Q5JVS0 413 aaKnown RBP16.65■□□□□ 0.26
DDX39A-221ENST00000593026 HYIQ5T013 277 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 TRAF7Q6Q0C0 670 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 KIAA0319LQ8IZA0 1049 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 NME8Q8N427 588 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 LINC01465Q8N7H1 131 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 RASSF8Q8NHQ8 419 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 CALML4Q96GE6 196 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 CHAMP1Q96JM3 812 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 MAP7D2Q96T17 732 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 GDF15Q99988 308 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 DHX33Q9H6R0 707 aaKnown RBP16.65■□□□□ 0.26
DDX39A-221ENST00000593026 BMP2KQ9NSY1 1161 aaPredicted RBP16.65■□□□□ 0.26
DDX39A-221ENST00000593026 CEP290O15078 2479 aa16.65■□□□□ 0.26
DDX39A-221ENST00000593026 EVPLQ92817 2033 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 IGKV6-21A0A0C4DH24 114 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 ARHGEF35A5YM69 484 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 TXLNAP40222 546 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 TMEM62Q0P6H9 643 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 GRB10Q13322 594 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 EMC2Q15006 297 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 FAM26DQ5JW98 314 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 SPECC1Q5M775 1068 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 IER5Q5VY09 327 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 KCTD17Q8N5Z5 321 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 SPATA32Q96LK8 384 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 PNMA5Q96PV4 448 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 PLIN2Q99541 437 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 UBE2OQ9C0C9 1292 aaKnown RBP16.64■□□□□ 0.25
DDX39A-221ENST00000593026 DNM3Q9UQ16 869 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 COLQQ9Y215 455 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-221ENST00000593026 AKT3Q9Y243 479 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 CDY2AQ9Y6F7 541 aa16.64■□□□□ 0.25
DDX39A-221ENST00000593026 E9PMD0 336 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 GAS2O43903 313 aaKnown RBP16.63■□□□□ 0.25
DDX39A-221ENST00000593026 USO1O60763 962 aaKnown RBP16.63■□□□□ 0.25
DDX39A-221ENST00000593026 CUTAO60888 179 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 DGAT1O75907 488 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 EYA4O95677 639 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 CHRNA1P02708 482 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 VTNP04004 478 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 PFKMP08237 780 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 ME1P48163 572 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 MGAT3Q09327 533 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 TMEM119Q4V9L6 283 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 CHRDL2Q6WN34 429 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 DEFB128Q7Z7B8 93 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 RPUSD2Q8IZ73 545 aaKnown RBP16.63■□□□□ 0.25
DDX39A-221ENST00000593026 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
DDX39A-221ENST00000593026 EPSTI1Q96J88 318 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 MTRQ99707 1265 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 CCSER1Q9C0I3 900 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 BHMT2Q9H2M3 363 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 ATP6V0A4Q9HBG4 840 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 IL23AQ9NPF7 189 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 RCOR1Q9UKL0 485 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 TRPV2Q9Y5S1 764 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 SCN5AQ14524 2016 aa16.63■□□□□ 0.25
DDX39A-221ENST00000593026 LOXHD1Q8IVV2 1947 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 NBNO60934 754 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 EPHB4P54760 987 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-221ENST00000593026 DRP2Q13474 957 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 MBTPS1Q14703 1052 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
DDX39A-221ENST00000593026 USP49Q70CQ1 688 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 KCNK18Q7Z418 384 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 LEO1Q8WVC0 666 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-221ENST00000593026 TCP11Q8WWU5 503 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 IPO9Q96P70 1041 aaKnown RBP16.62■□□□□ 0.25
DDX39A-221ENST00000593026 PPP1R16BQ96T49 567 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 CELF4Q9BZC1 486 aaKnown RBP16.62■□□□□ 0.25
DDX39A-221ENST00000593026 SCAND2PQ9GZW5 306 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-221ENST00000593026 CHMP5Q9NZZ3 219 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 SUCLA2Q9P2R7 463 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-221ENST00000593026 CCDC39Q9UFE4 941 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 GINS2Q9Y248 185 aa16.62■□□□□ 0.25
DDX39A-221ENST00000593026 SIP14410 1827 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 ACRP10323 421 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 PLCG1P19174 1290 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 BMP8BP34820 402 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 GPNMBQ14956 572 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 KIZQ2M2Z5 673 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 PSRC1Q6PGN9 363 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-221ENST00000593026 PADI6Q6TGC4 694 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 ZNF710Q8N1W2 664 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 MCPH1Q8NEM0 835 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 PSPC1Q8WXF1 523 aaKnown RBP16.61■□□□□ 0.25
DDX39A-221ENST00000593026 TMEM143Q96AN5 459 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 SCLT1Q96NL6 688 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 XPNPEP1Q9NQW7 623 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 PCDHA7Q9UN72 937 aa16.61■□□□□ 0.25
DDX39A-221ENST00000593026 A0A1W2PPC1 479 aa16.6■□□□□ 0.25
DDX39A-221ENST00000593026 SLC34A2O95436 690 aa16.6■□□□□ 0.25
DDX39A-221ENST00000593026 CXCL10P02778 98 aa16.6■□□□□ 0.25
DDX39A-221ENST00000593026 SSBP05455 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX39A-221ENST00000593026 GHRP10912 638 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms