RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 TPRP12270 2363 aaKnown RBP11.65□□□□□ -0.54
SDF2-209ENST00000591903 MARK3P27448 753 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 TROAPQ12815 778 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.54
SDF2-209ENST00000591903 PCNX4Q63HM2 1172 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 ZC3H14Q6PJT7 736 aaKnown RBP11.65□□□□□ -0.54
SDF2-209ENST00000591903 SLC24A5Q71RS6 500 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 CATIPQ7Z7H3 387 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 KIAA2013Q8IYS2 634 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 STAG2Q8N3U4 1231 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 ZNF274Q96GC6 653 aaPredicted RBP11.65□□□□□ -0.54
SDF2-209ENST00000591903 FAM49AQ9H0Q0 323 aaPredicted RBP11.65□□□□□ -0.54
SDF2-209ENST00000591903 TMX1Q9H3N1 280 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 PDRG1Q9NUG6 133 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 TYW1Q9NV66 732 aaKnown RBP11.65□□□□□ -0.54
SDF2-209ENST00000591903 DLL3Q9NYJ7 618 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 RTEL1Q9NZ71 1219 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 PCDHA2Q9Y5H9 948 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 HCFC2Q9Y5Z7 792 aa11.65□□□□□ -0.54
SDF2-209ENST00000591903 EVPLQ92817 2033 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 DENND3A2RUS2 1198 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 CCDC69A6NI79 296 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 HIDE1A8MVS5 230 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 HOXA2O43364 376 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 ASGR2P07307 311 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 KIF5BP33176 963 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 GNAQP50148 359 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 IGBP1P78318 339 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 FGD1P98174 961 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 KRT76Q01546 638 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 NFX1Q12986 1120 aaKnown RBP11.64□□□□□ -0.55
SDF2-209ENST00000591903 SMC1AQ14683 1233 aaKnown RBP11.64□□□□□ -0.55
SDF2-209ENST00000591903 ATAT1Q5SQI0 421 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 KIAA1841Q6NSI8 718 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 APOA5Q6Q788 366 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 SYNE3Q6ZMZ3 975 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 TMC7Q7Z402 723 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 HOMER1Q86YM7 354 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 ACSF2Q96CM8 615 aaPredicted RBP11.64□□□□□ -0.55
SDF2-209ENST00000591903 GPRASP2Q96D09 838 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 CNTNAP3BQ96NU0 1288 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 HINFPQ9BQA5 517 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 CNTNAP3Q9BZ76 1288 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 SMOC2Q9H3U7 446 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 CWH43Q9H720 699 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 ELAC1Q9H777 363 aaKnown RBP11.64□□□□□ -0.55
SDF2-209ENST00000591903 CYP26B1Q9NR63 512 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 RGS18Q9NS28 235 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 DZANK1Q9NVP4 752 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 LIMD1Q9UGP4 676 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 DBR1Q9UK59 544 aaKnown RBP11.64□□□□□ -0.55
SDF2-209ENST00000591903 SLC12A7Q9Y666 1083 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 CEP250Q9BV73 2442 aa11.64□□□□□ -0.55
SDF2-209ENST00000591903 NCOR2Q9Y618 2525 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 PNMA6FA0A0J9YX94 578 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 SMIM35A0A1B0GVV1 85 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 PALM3A6NDB9 673 aaPredicted RBP11.63□□□□□ -0.55
SDF2-209ENST00000591903 EOMESO95936 686 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 INSRRP14616 1297 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 NPR3P17342 541 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 SDHBP21912 280 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 NEK4P51957 841 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 APOBRQ0VD83 1088 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 Q6ZUG5 572 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 ZNF654Q8IZM8 581 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 CYP2W1Q8TAV3 490 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 CUL5Q93034 780 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 ZNF558Q96NG5 402 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 ADAM2Q99965 735 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 RIOX1Q9H6W3 641 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 ATP6V0A4Q9HBG4 840 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 ERVK-5Q9HDB9 667 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 RBM28Q9NW13 759 aaKnown RBP11.63□□□□□ -0.55
SDF2-209ENST00000591903 TMEM161AQ9NX61 479 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 MAD2L2Q9UI95 211 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 FBXL21Q9UKT6 434 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 DUSP12Q9UNI6 340 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 TELO2Q9Y4R8 837 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 OTOGLQ3ZCN5 2332 aa11.63□□□□□ -0.55
SDF2-209ENST00000591903 FRYLO94915 3013 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 GSTTP1A0A1W2PQM5 241 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 C9IYK1 514 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 GPR182O15218 404 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 ZBTB43O43298 467 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 PI15O43692 258 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 RPS6KA5O75582 802 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 KCNA2P16389 499 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 IBSPP21815 317 aaPredicted RBP11.62□□□□□ -0.55
SDF2-209ENST00000591903 TMEM62Q0P6H9 643 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 TDGQ13569 410 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 TOB2Q14106 344 aaPredicted RBP11.62□□□□□ -0.55
SDF2-209ENST00000591903 GRM4Q14833 912 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 FAM102BQ5T8I3 360 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 TEX2Q8IWB9 1127 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 LRRC43Q8N309 656 aa11.62□□□□□ -0.55
SDF2-209ENST00000591903 MRPL43Q8N983 215 aaKnown RBP11.62□□□□□ -0.55
SDF2-209ENST00000591903 CTCFLQ8NI51 663 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms