RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 CALM2P0DP24 149 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 CALM3P0DP25 149 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 NAPAP54920 295 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 FGD1P98174 961 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 BLOC1S2Q6QNY1 142 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 LINC01465Q8N7H1 131 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 ZNF668Q96K58 619 aaPredicted RBP16.09■□□□□ 0.17
SAFB2-205ENST00000590000 RPGRIP1Q96KN7 1286 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 SDF4Q9BRK5 362 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 APOL5Q9BWW9 433 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 TLE6Q9H808 572 aa16.09■□□□□ 0.17
SAFB2-205ENST00000590000 DMDP11532 3685 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 KLF18A0A0U1RQI7 1052 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 SMCO2A6NFE2 343 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 HBP1O60381 514 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 HMGB1P09429 215 aaKnown RBP16.08■□□□□ 0.16
SAFB2-205ENST00000590000 JAKMIP3Q5VZ66 844 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 SWSAP1Q6NVH7 229 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 NME8Q8N427 588 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 PBXIP1Q96AQ6 731 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 MFSD14AQ96MC6 490 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 CASD1Q96PB1 797 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 PHF7Q9BWX1 381 aaPredicted RBP16.08■□□□□ 0.16
SAFB2-205ENST00000590000 SMOC2Q9H3U7 446 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 TLR9Q9NR96 1032 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 FAM86C1Q9NVL1 165 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 PCDHB7Q9Y5E2 793 aa16.08■□□□□ 0.16
SAFB2-205ENST00000590000 M0QZ92 97 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 CLCN3P51790 818 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 ADCY7P51828 1080 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 SLC24A5Q71RS6 500 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 TRMT1LQ7Z2T5 733 aaKnown RBP16.07■□□□□ 0.16
SAFB2-205ENST00000590000 PLA2G4DQ86XP0 818 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 BRF1Q92994 677 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 LENG9Q96B70 501 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 LARP6Q9BRS8 491 aaKnown RBP16.07■□□□□ 0.16
SAFB2-205ENST00000590000 ZNF302Q9NR11 478 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 BARHL2Q9NY43 387 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 LRFN2Q9ULH4 789 aa16.07■□□□□ 0.16
SAFB2-205ENST00000590000 MAFBQ9Y5Q3 323 aaPredicted RBP16.07■□□□□ 0.16
SAFB2-205ENST00000590000 SPTBN4Q9H254 2564 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 COL1A2P08123 1366 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 BACH1O14867 736 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 ZBTB43O43298 467 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 ZNF862O60290 1169 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 RPLP2P05387 115 aaKnown RBP16.06■□□□□ 0.16
SAFB2-205ENST00000590000 ATF7P17544 494 aaPredicted RBP16.06■□□□□ 0.16
SAFB2-205ENST00000590000 SP100P23497 879 aaPredicted RBP16.06■□□□□ 0.16
SAFB2-205ENST00000590000 PSMA5P28066 241 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 ADD1P35611 737 aaKnown RBP16.06■□□□□ 0.16
SAFB2-205ENST00000590000 PKN1Q16512 942 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 RTN1Q16799 776 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 CLLU1OSQ5K130 101 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 PLPP4Q5VZY2 271 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 ANKRD54Q6NXT1 300 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 PPP1R18Q6NYC8 613 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 TMEM184AQ6ZMB5 413 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 NIPA1Q7RTP0 329 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 RASGRP4Q8TDF6 673 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 ADAMTS10Q9H324 1103 aa16.06■□□□□ 0.16
SAFB2-205ENST00000590000 GOLGA8AA7E2F4 631 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 GOLGA8BA8MQT2 603 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 IPO5O00410 1097 aaKnown RBP16.05■□□□□ 0.16
SAFB2-205ENST00000590000 SEC24BO95487 1268 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 FOSP01100 380 aaPredicted RBP16.05■□□□□ 0.16
SAFB2-205ENST00000590000 CYP3A4P08684 503 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 FGFR4P22455 802 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 SLC26A2P50443 739 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 CRYBB1P53674 252 aaPredicted RBP16.05■□□□□ 0.16
SAFB2-205ENST00000590000 UBE3AQ05086 875 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 UGCGQ16739 394 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 ZNF484Q5JVG2 852 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 LRRC71Q8N4P6 559 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 FBXL6Q8N531 539 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 MICAL1Q8TDZ2 1067 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 GJA10Q969M2 543 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 TMEM161AQ9NX61 479 aa16.05■□□□□ 0.16
SAFB2-205ENST00000590000 DENND3A2RUS2 1198 aa16.04■□□□□ 0.16
SAFB2-205ENST00000590000 AP3B2Q13367 1082 aa16.04■□□□□ 0.16
SAFB2-205ENST00000590000 DRP2Q13474 957 aa16.04■□□□□ 0.16
SAFB2-205ENST00000590000 SPOUT1Q5T280 376 aaKnown RBP16.04■□□□□ 0.16
SAFB2-205ENST00000590000 LLGL2Q6P1M3 1020 aa16.04■□□□□ 0.16
SAFB2-205ENST00000590000 RUFY3Q7L099 469 aa16.04■□□□□ 0.16
SAFB2-205ENST00000590000 TMEM173Q86WV6 379 aaPredicted RBP16.04■□□□□ 0.16
SAFB2-205ENST00000590000 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
SAFB2-205ENST00000590000 MRPS27Q92552 414 aaKnown RBP16.04■□□□□ 0.16
SAFB2-205ENST00000590000 ZSWIM6Q9HCJ5 1215 aa16.04■□□□□ 0.16
SAFB2-205ENST00000590000 C1orf112Q9NSG2 853 aa16.04■□□□□ 0.16
SAFB2-205ENST00000590000 PCDHB12Q9Y5F1 795 aa16.04■□□□□ 0.16
SAFB2-205ENST00000590000 RIF1Q5UIP0 2472 aaKnown RBP16.03■□□□□ 0.16
SAFB2-205ENST00000590000 EPB41L2O43491 1005 aaKnown RBP16.03■□□□□ 0.16
SAFB2-205ENST00000590000 B4GALT3O60512 393 aa16.03■□□□□ 0.16
SAFB2-205ENST00000590000 CSDE1O75534 798 aaKnown RBP16.03■□□□□ 0.16
SAFB2-205ENST00000590000 TECP42680 631 aa16.03■□□□□ 0.16
SAFB2-205ENST00000590000 NLRP11P59045 1033 aaKnown RBP16.03■□□□□ 0.16
SAFB2-205ENST00000590000 PLCB3Q01970 1234 aa16.03■□□□□ 0.16
SAFB2-205ENST00000590000 SIGLEC14Q08ET2 396 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms