RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 FAM122AQ96E09 287 aa23.82■■□□□ 1.4
TMC6-213ENST00000589933 POP1Q99575 1024 aaKnown RBP23.82■■□□□ 1.4
TMC6-213ENST00000589933 OSMRQ99650 979 aa23.82■■□□□ 1.4
TMC6-213ENST00000589933 UPF3BQ9BZI7 483 aaKnown RBP23.82■■□□□ 1.4
TMC6-213ENST00000589933 VTNP04004 478 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 ITGB1P05556 798 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 ZSCAN20P17040 1043 aaPredicted RBP23.81■■□□□ 1.4
TMC6-213ENST00000589933 CTC1Q2NKJ3 1217 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 LRCH2Q5VUJ6 765 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 EFCAB12Q6NXP0 572 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 FAM177A1Q8N128 213 aaPredicted RBP23.81■■□□□ 1.4
TMC6-213ENST00000589933 SPPL3Q8TCT6 385 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 PPP1R16BQ96T49 567 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 CDHR5Q9HBB8 845 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 ATP6V0A4Q9HBG4 840 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 NCOA5Q9HCD5 579 aaKnown RBP23.81■■□□□ 1.4
TMC6-213ENST00000589933 CD320Q9NPF0 282 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 PLXNA4Q9HCM2 1894 aa23.81■■□□□ 1.4
TMC6-213ENST00000589933 FSD2A1L4K1 749 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 TBKBP1A7MCY6 615 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 HOXA2O43364 376 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 PPFIA3O75145 1194 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 DEXIO95424 95 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 OATP04181 439 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 NDUFV1P49821 464 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 UBE3AQ05086 875 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 MICAL1Q8TDZ2 1067 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 POF1BQ8WVV4 589 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 SCLT1Q96NL6 688 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 ELAC1Q9H777 363 aaKnown RBP23.8■■□□□ 1.4
TMC6-213ENST00000589933 ZSWIM6Q9HCJ5 1215 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 TMEM161AQ9NX61 479 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 RAPGEFL1Q9UHV5 662 aa23.8■■□□□ 1.4
TMC6-213ENST00000589933 C9IYK1 514 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 MSH4O15457 936 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 MGEA5O60502 916 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 CLCN3P51790 818 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 GALNT17Q6IS24 598 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 ADHFE1Q8IWW8 467 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 RDM1Q8NG50 284 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 TMEM40Q8WWA1 233 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 ZNF274Q96GC6 653 aaPredicted RBP23.79■■□□□ 1.4
TMC6-213ENST00000589933 CD207Q9UJ71 328 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 PCDHA4Q9UN74 947 aa23.79■■□□□ 1.4
TMC6-213ENST00000589933 ARIH1Q9Y4X5 557 aaPredicted RBP23.79■■□□□ 1.4
TMC6-213ENST00000589933 ADAMTS3O15072 1205 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 CHMP2AO43633 222 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 GPR32O75388 356 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 LTBRP36941 435 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 NLRP11P59045 1033 aaKnown RBP23.78■■□□□ 1.4
TMC6-213ENST00000589933 CDC42EP1Q00587 391 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 PRKCEQ02156 737 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 TBC1D8BQ0IIM8 1120 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 SMAD4Q13485 552 aaKnown RBP23.78■■□□□ 1.4
TMC6-213ENST00000589933 FAM228AQ86W67 206 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 THNSL1Q8IYQ7 743 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 ABI1Q8IZP0 508 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 TBCKQ8TEA7 893 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 LENG9Q96B70 501 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 TM6SF1Q9BZW5 370 aa23.78■■□□□ 1.4
TMC6-213ENST00000589933 LAG3P18627 525 aa23.77■■□□□ 1.4
TMC6-213ENST00000589933 PLA2G5P39877 138 aa23.77■■□□□ 1.4
TMC6-213ENST00000589933 GATMP50440 423 aa23.77■■□□□ 1.4
TMC6-213ENST00000589933 ADAM15Q13444 863 aa23.77■■□□□ 1.4
TMC6-213ENST00000589933 SMAD2Q15796 467 aaKnown RBP23.77■■□□□ 1.4
TMC6-213ENST00000589933 CLUL1Q15846 466 aa23.77■■□□□ 1.4
TMC6-213ENST00000589933 PDE12Q6L8Q7 609 aaKnown RBP23.77■■□□□ 1.4
TMC6-213ENST00000589933 MIER3Q7Z3K6 550 aa23.77■■□□□ 1.4
TMC6-213ENST00000589933 BLIDQ8IZY5 108 aa23.77■■□□□ 1.4
TMC6-213ENST00000589933 SLC5A5Q92911 643 aa23.77■■□□□ 1.4
TMC6-213ENST00000589933 KHSRPQ92945 711 aaKnown RBP eCLIP23.77■■□□□ 1.4
TMC6-213ENST00000589933 MBTPS2O43462 519 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 DCXO43602 365 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 CDKL5O76039 1030 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 XBP1P17861 261 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 EIF4BP23588 611 aaKnown RBP23.76■■□□□ 1.39
TMC6-213ENST00000589933 ZP2Q05996 745 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 CAMK1Q14012 370 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 TOB2Q14106 344 aaPredicted RBP23.76■■□□□ 1.39
TMC6-213ENST00000589933 Q4G0T1 1027 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 FAM102BQ5T8I3 360 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 EFHBQ8N7U6 833 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 TLE6Q9H808 572 aa23.76■■□□□ 1.39
TMC6-213ENST00000589933 PUF60Q9UHX1 559 aaKnown RBP23.76■■□□□ 1.39
TMC6-213ENST00000589933 PRR33A8MZF0 331 aa23.75■■□□□ 1.39
TMC6-213ENST00000589933 NEFLP07196 543 aa23.75■■□□□ 1.39
TMC6-213ENST00000589933 NRIP1P48552 1158 aa23.75■■□□□ 1.39
TMC6-213ENST00000589933 DNM2P50570 870 aa23.75■■□□□ 1.39
TMC6-213ENST00000589933 FAM189BP81408 668 aa23.75■■□□□ 1.39
TMC6-213ENST00000589933 LRRC71Q8N4P6 559 aa23.75■■□□□ 1.39
TMC6-213ENST00000589933 TMEM117Q9H0C3 514 aa23.75■■□□□ 1.39
TMC6-213ENST00000589933 TLR9Q9NR96 1032 aa23.75■■□□□ 1.39
TMC6-213ENST00000589933 FAM86C2PA6NEL3 165 aa23.74■■□□□ 1.39
TMC6-213ENST00000589933 TBX10O75333 385 aa23.74■■□□□ 1.39
TMC6-213ENST00000589933 SRGAP2BP0DMP2 458 aa23.74■■□□□ 1.39
TMC6-213ENST00000589933 DNAJB1P25685 340 aa23.74■■□□□ 1.39
TMC6-213ENST00000589933 GTF2F1P35269 517 aaKnown RBP eCLIP23.74■■□□□ 1.391e-7■■■■■ 28
TMC6-213ENST00000589933 DLX2Q07687 328 aaPredicted RBP23.74■■□□□ 1.39
TMC6-213ENST00000589933 DSC3Q14574 896 aa23.74■■□□□ 1.39
TMC6-213ENST00000589933 NONOQ15233 471 aaKnown RBP eCLIP23.74■■□□□ 1.397e-10■■■□□ 17.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms