RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	PCDHB6	Q9Y5E3	794 aa		19.43	■□□□□ 0.7
MBD1-221	ENST00000589867	POTEM	A6NI47	508 aa		19.42	■□□□□ 0.7
MBD1-221	ENST00000589867	DDX11L8	A8MPP1	907 aa		19.42	■□□□□ 0.7
MBD1-221	ENST00000589867	CA3	P07451	260 aa		19.42	■□□□□ 0.7
MBD1-221	ENST00000589867	CYP4A11	Q02928	519 aa		19.42	■□□□□ 0.7
MBD1-221	ENST00000589867	KIZ	Q2M2Z5	673 aa		19.42	■□□□□ 0.7
MBD1-221	ENST00000589867	TMEM266	Q2M3C6	531 aa		19.42	■□□□□ 0.7
MBD1-221	ENST00000589867	METTL13	Q8N6R0	699 aa		19.42	■□□□□ 0.7
MBD1-221	ENST00000589867	PADI3	Q9ULW8	664 aa		19.42	■□□□□ 0.7
MBD1-221	ENST00000589867	NOC2L	Q9Y3T9	749 aa	Known RBP	19.42	■□□□□ 0.7
MBD1-221	ENST00000589867	ENPP3	O14638	875 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	MARCH6	O60337	910 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	SPATA31C1	P0DKV0	1188 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	TAP1	Q03518	808 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	ORC2	Q13416	577 aa	Predicted RBP	19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	CRIPAK	Q8N1N5	446 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	MYLIP	Q8WY64	445 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	TOP1MT	Q969P6	601 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	ERVK-5	Q9HDB9	667 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	CYP26B1	Q9NR63	512 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	STXBP5L	Q9Y2K9	1186 aa		19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	19.41	■□□□□ 0.7
MBD1-221	ENST00000589867	REV3L	O60673	3130 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	EPOP	A6NHQ4	379 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	MGEA5	O60502	916 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	MAF	O75444	373 aa	Predicted RBP	19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	LYPLA2	O95372	231 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	OR52Z1	P0C646	297 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	HTRA4	P83105	476 aa	Predicted RBP	19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	TBC1D8B	Q0IIM8	1120 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	IL17A	Q16552	155 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	FAM117B	Q6P1L5	589 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	FAM228A	Q86W67	206 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	MYOCD	Q8IZQ8	938 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	USP38	Q8NB14	1042 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	ZNF668	Q96K58	619 aa	Predicted RBP	19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	OSMR	Q99650	979 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	SUGCT	Q9HAC7	445 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	GINS2	Q9Y248	185 aa		19.4	■□□□□ 0.7
MBD1-221	ENST00000589867	SPTBN5	Q9NRC6	3674 aa	Known RBP	19.39	■□□□□ 0.69
MBD1-221	ENST00000589867		A0A087WWV3	80 aa		19.39	■□□□□ 0.69
MBD1-221	ENST00000589867	TLL1	O43897	1013 aa		19.39	■□□□□ 0.69
MBD1-221	ENST00000589867	GPC3	P51654	580 aa		19.39	■□□□□ 0.69
MBD1-221	ENST00000589867	CRYBB1	P53674	252 aa	Predicted RBP	19.39	■□□□□ 0.69
MBD1-221	ENST00000589867	NLRP11	P59045	1033 aa	Known RBP	19.39	■□□□□ 0.69
MBD1-221	ENST00000589867	ADGRE1	Q14246	886 aa		19.39	■□□□□ 0.69
MBD1-221	ENST00000589867	DHX33	Q9H6R0	707 aa	Known RBP	19.39	■□□□□ 0.69
MBD1-221	ENST00000589867	ZSWIM4	Q9H7M6	989 aa		19.39	■□□□□ 0.69
MBD1-221	ENST00000589867	KIF3A	Q9Y496	699 aa		19.39	■□□□□ 0.69
MBD1-221	ENST00000589867		M0QZ92	97 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	MED24	O75448	989 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	AMH	P03971	560 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	YWHAB	P31946	246 aa	Known RBP	19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	TEC	P42680	631 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	PTGDR	Q13258	359 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	GNL2	Q13823	731 aa	Known RBP	19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	LARP1B	Q659C4	914 aa	Known RBP	19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	PPP2R2D	Q66LE6	453 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	MCTP1	Q6DN14	999 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	TPH2	Q8IWU9	490 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	SP7	Q8TDD2	431 aa	Predicted RBP	19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	SNX21	Q969T3	373 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	RAD9A	Q99638	391 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	TSPYL2	Q9H2G4	693 aa	Predicted RBP	19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	PRDM12	Q9H4Q4	367 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	SLC28A3	Q9HAS3	691 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	RC3H2	Q9HBD1	1191 aa	Known RBP	19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	XPNPEP1	Q9NQW7	623 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	AKT3	Q9Y243	479 aa		19.38	■□□□□ 0.69
MBD1-221	ENST00000589867	DSC3	Q14574	896 aa		19.37	■□□□□ 0.69
MBD1-221	ENST00000589867	ECM1	Q16610	540 aa		19.37	■□□□□ 0.69
MBD1-221	ENST00000589867	CATSPER3	Q86XQ3	398 aa		19.37	■□□□□ 0.69
MBD1-221	ENST00000589867	CEP170P1	Q96L14	293 aa		19.37	■□□□□ 0.69
MBD1-221	ENST00000589867	NOL7	Q9UMY1	257 aa	Known RBP	19.37	■□□□□ 0.69
MBD1-221	ENST00000589867	ST3GAL5	Q9UNP4	418 aa		19.37	■□□□□ 0.69
MBD1-221	ENST00000589867	PRRC2B	Q5JSZ5	2229 aa	Known RBP	19.37	■□□□□ 0.69
MBD1-221	ENST00000589867	LINC01553	A4QN01	128 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867		K7ELQ4	463 aa	Predicted RBP	19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	RFXAP	O00287	272 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	DKC1	O60832	514 aa	Known RBP eCLIP	19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	RPS6KA5	O75582	802 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	LINC00271	P0C7V0	271 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	TMOD1	P28289	359 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	FXR2	P51116	673 aa	Known RBP eCLIP	19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	PAK2	Q13177	524 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	KSR1	Q8IVT5	923 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	NEK9	Q8TD19	979 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	INTS4	Q96HW7	963 aa	Known RBP	19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	MAP7D2	Q96T17	732 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867	CERS4	Q9HA82	394 aa		19.36	■□□□□ 0.69
MBD1-221	ENST00000589867		H3BQV1	296 aa		19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	CSDE1	O75534	798 aa	Known RBP	19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	UPP2	O95045	317 aa		19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	DARS	P14868	501 aa	Known RBP	19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	IGSF22	Q8N9C0	903 aa		19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	PIGO	Q8TEQ8	1089 aa		19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	TMEM143	Q96AN5	459 aa		19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	ZBED2	Q9BTP6	218 aa		19.35	■□□□□ 0.69
MBD1-221	ENST00000589867	POLR3C	Q9BUI4	534 aa	Predicted RBP	19.35	■□□□□ 0.69

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