RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 EFCAB12Q6NXP0 572 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 PADI6Q6TGC4 694 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 ANKRD33Q7Z3H0 272 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 FAM126BQ8IXS8 530 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 METTL13Q8N6R0 699 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 LRRC15Q8TF66 581 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 TOX2Q96NM4 488 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 CEP89Q96ST8 783 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 MTRQ99707 1265 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 HTATIP2Q9BUP3 242 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 LRRC27Q9C0I9 530 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 TRPV6Q9H1D0 765 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 DHX33Q9H6R0 707 aaKnown RBP15.15■□□□□ 0.02
VMP1-210ENST00000589823 SUGCTQ9HAC7 445 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 ATP6V0A4Q9HBG4 840 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 BMP2KQ9NSY1 1161 aaPredicted RBP15.15■□□□□ 0.02
VMP1-210ENST00000589823 LMBRD1Q9NUN5 540 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 TRMT13Q9NUP7 481 aaKnown RBP15.15■□□□□ 0.02
VMP1-210ENST00000589823 SERTAD1Q9UHV2 236 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 PCDHA2Q9Y5H9 948 aa15.15■□□□□ 0.02
VMP1-210ENST00000589823 SMIM35A0A1B0GVV1 85 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 ZNF202O95125 648 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 RPLP2P05387 115 aaKnown RBP15.14■□□□□ 0.01
VMP1-210ENST00000589823 SLFN14P0C7P3 912 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 CYP11B2P19099 503 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 AMPD3Q01432 767 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 TLE2Q04725 743 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 PTK7Q13308 1070 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 RINT1Q6NUQ1 792 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 TAF2Q6P1X5 1199 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 RSPH3Q86UC2 560 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 GPBP1Q86WP2 473 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 FMR1NBQ8N0W7 255 aaPredicted RBP15.14■□□□□ 0.01
VMP1-210ENST00000589823 CNNM3Q8NE01 707 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 MCPH1Q8NEM0 835 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 TCP11Q8WWU5 503 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 ZBTB10Q96DT7 871 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 TNMDQ9H2S6 317 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 KCND2Q9NZV8 630 aa15.14■□□□□ 0.01
VMP1-210ENST00000589823 LOXHD1Q8IVV2 1947 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 IGKV6-21A0A0C4DH24 114 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 CD4P01730 458 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 KRT18P05783 430 aaKnown RBP15.13■□□□□ 0.01
VMP1-210ENST00000589823 LIG1P18858 919 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 LONRF3Q496Y0 759 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 C1orf186Q6ZWK4 172 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 SERINC5Q86VE9 423 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 LRRC71Q8N4P6 559 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 CCDC155Q8N6L0 562 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 MAP7D2Q96T17 732 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 TIPINQ9BVW5 301 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 FAM49AQ9H0Q0 323 aaPredicted RBP15.13■□□□□ 0.01
VMP1-210ENST00000589823 AKT3Q9Y243 479 aa15.13■□□□□ 0.01
VMP1-210ENST00000589823 KAT6AQ92794 2004 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 ACTN4O43707 911 aaKnown RBP15.12■□□□□ 0.01
VMP1-210ENST00000589823 KINO60870 393 aaKnown RBP15.12■□□□□ 0.01
VMP1-210ENST00000589823 NR1I2O75469 434 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 PTMSP20962 102 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 GUCY2CP25092 1073 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 CLCN3P51790 818 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 FAM102BQ5T8I3 360 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 IER5Q5VY09 327 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 KANK3Q6NY19 840 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 RUFY4Q6ZNE9 571 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 KRBA2Q6ZNG9 492 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 MAEAQ7L5Y9 396 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 ENGASEQ8NFI3 743 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 DNAJB3Q8WWF6 145 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 TMEM143Q96AN5 459 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 RUSC1Q9BVN2 902 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 PDLIM7Q9NR12 457 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 KBTBD4Q9NVX7 518 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 SUCLA2Q9P2R7 463 aaPredicted RBP15.12■□□□□ 0.01
VMP1-210ENST00000589823 ARID2Q68CP9 1835 aa15.12■□□□□ 0.01
VMP1-210ENST00000589823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.11■□□□□ 0.01
VMP1-210ENST00000589823 MYMKA6NI61 221 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 CLTBP09497 229 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 AFMP43652 599 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 RAD51AP2Q09MP3 1159 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 FAAP100Q0VG06 881 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 BFSP2Q13515 415 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 SNW1Q13573 536 aaKnown RBP15.11■□□□□ 0.01
VMP1-210ENST00000589823 ARSHQ5FYA8 562 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 NME8Q8N427 588 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 LINC01465Q8N7H1 131 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 CAGE1Q8TC20 777 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 PSPC1Q8WXF1 523 aaKnown RBP15.11■□□□□ 0.01
VMP1-210ENST00000589823 DDX12PQ92771 950 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 STAMQ92783 540 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 KIFAP3Q92845 792 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 DRC1Q96MC2 740 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 TIGD1Q96MW7 591 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 CTAGE1Q96RT6 745 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 POLR3FQ9H1D9 316 aaPredicted RBP15.11■□□□□ 0.01
VMP1-210ENST00000589823 XPNPEP1Q9NQW7 623 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 TMEM39AQ9NV64 488 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 DACT1Q9NYF0 836 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 HOOK1Q9UJC3 728 aaKnown RBP15.11■□□□□ 0.01
VMP1-210ENST00000589823 ODF2LQ9ULJ1 636 aa15.11■□□□□ 0.01
VMP1-210ENST00000589823 NPHP3-ACAD11A0A0J9YXS1 232 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms