RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PAGE5Q96GU1 130 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 JPH2Q9BR39 696 aaPredicted RBP16.88■□□□□ 0.29
ATG4D-211ENST00000589753 RUSC1Q9BVN2 902 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 DHX33Q9H6R0 707 aaKnown RBP16.88■□□□□ 0.29
ATG4D-211ENST00000589753 ATP6V0A4Q9HBG4 840 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 BMP2KQ9NSY1 1161 aaPredicted RBP16.88■□□□□ 0.29
ATG4D-211ENST00000589753 TUBE1Q9UJT0 475 aa16.88■□□□□ 0.29
ATG4D-211ENST00000589753 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-211ENST00000589753 MBLAC1A4D2B0 266 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-211ENST00000589753 KRT18P05783 430 aaKnown RBP16.87■□□□□ 0.29
ATG4D-211ENST00000589753 ADAM17P78536 824 aa16.87■□□□□ 0.29
ATG4D-211ENST00000589753 HIC1Q14526 733 aa16.87■□□□□ 0.29
ATG4D-211ENST00000589753 EMC2Q15006 297 aa16.87■□□□□ 0.29
ATG4D-211ENST00000589753 GDF6Q6KF10 455 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-211ENST00000589753 SLC39A5Q6ZMH5 540 aa16.87■□□□□ 0.29
ATG4D-211ENST00000589753 GRAMD1CQ8IYS0 662 aa16.87■□□□□ 0.29
ATG4D-211ENST00000589753 TNS4Q8IZW8 715 aa16.87■□□□□ 0.29
ATG4D-211ENST00000589753 RETREG2Q8NC44 543 aa16.87■□□□□ 0.29
ATG4D-211ENST00000589753 MTRQ99707 1265 aa16.87■□□□□ 0.29
ATG4D-211ENST00000589753 IGKV6-21A0A0C4DH24 114 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 MYMKA6NI61 221 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 TREHO43280 583 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 GAS2O43903 313 aaKnown RBP16.86■□□□□ 0.29
ATG4D-211ENST00000589753 GUCY2CP25092 1073 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 CDK7P50613 346 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 ATN1P54259 1190 aaPredicted RBP16.86■□□□□ 0.29
ATG4D-211ENST00000589753 ZNF200P98182 395 aaPredicted RBP16.86■□□□□ 0.29
ATG4D-211ENST00000589753 ARSHQ5FYA8 562 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 SH3RF1Q7Z6J0 888 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 METTL13Q8N6R0 699 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 DDX12PQ92771 950 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 ZBTB10Q96DT7 871 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 TIPINQ9BVW5 301 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 SUGCTQ9HAC7 445 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 XPNPEP1Q9NQW7 623 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 PDLIM7Q9NR12 457 aa16.86■□□□□ 0.29
ATG4D-211ENST00000589753 HOOK1Q9UJC3 728 aaKnown RBP16.86■□□□□ 0.29
ATG4D-211ENST00000589753 NPHP3-ACAD11A0A0J9YXS1 232 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 MYL1P05976 194 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 CYP2C9P11712 490 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 TMOD1P28289 359 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 RAD51AP2Q09MP3 1159 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 PTGISQ16647 500 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 C1orf53Q5VUE5 145 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 EFCAB12Q6NXP0 572 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 MAEAQ7L5Y9 396 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 DYMQ7RTS9 669 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 ELOA2Q8IYF1 753 aaPredicted RBP16.85■□□□□ 0.29
ATG4D-211ENST00000589753 LRRC71Q8N4P6 559 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 TCP11Q8WWU5 503 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 C7orf25Q9BPX7 421 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 TRIM9Q9C026 710 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 BLZF1Q9H2G9 400 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 NOD1Q9Y239 953 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 PCDHA2Q9Y5H9 948 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 MROH7Q68CQ1 1323 aa16.85■□□□□ 0.29
ATG4D-211ENST00000589753 SMIM35A0A1B0GVV1 85 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 CCDC85CA6NKD9 419 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-211ENST00000589753 HIP1RO75146 1068 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 DNM2P50570 870 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 SOX10P56693 466 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 MDM2Q00987 491 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-211ENST00000589753 CUL4BQ13620 913 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 GIT2Q14161 759 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 SNX17Q15036 470 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 POSTNQ15063 836 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 SKOR2Q2VWA4 1001 aaPredicted RBP16.84■□□□□ 0.29
ATG4D-211ENST00000589753 FAM102BQ5T8I3 360 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 IER5Q5VY09 327 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 TAF2Q6P1X5 1199 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 CNNM4Q6P4Q7 775 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 UBE2Q1Q7Z7E8 422 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 LINC01465Q8N7H1 131 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 TMEM143Q96AN5 459 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 DRC1Q96MC2 740 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 REEP2Q9BRK0 252 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 CLSTN2Q9H4D0 955 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 TRMT13Q9NUP7 481 aaKnown RBP16.84■□□□□ 0.29
ATG4D-211ENST00000589753 ODF2LQ9ULJ1 636 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 KAT6AQ92794 2004 aa16.84■□□□□ 0.29
ATG4D-211ENST00000589753 B4GALT4O60513 344 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 TBCAO75347 108 aaKnown RBP16.83■□□□□ 0.28
ATG4D-211ENST00000589753 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 CASP1P29466 404 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 CLCN3P51790 818 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 ASIC1P78348 528 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 CACNB1Q02641 598 aaPredicted RBP16.83■□□□□ 0.28
ATG4D-211ENST00000589753 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.28
ATG4D-211ENST00000589753 PNOCQ13519 176 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 CAMK4Q16566 473 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 KLHL40Q2TBA0 621 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 RUFY4Q6ZNE9 571 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 SERINC5Q86VE9 423 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 FAM126BQ8IXS8 530 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 KIFAP3Q92845 792 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 DNAJC19Q96DA6 116 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 CTAGE1Q96RT6 745 aa16.83■□□□□ 0.28
ATG4D-211ENST00000589753 MAP7D2Q96T17 732 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms