RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 AUTS2Q8WXX7 1259 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 C1orf112Q9NSG2 853 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 TMEM161AQ9NX61 479 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 LIMD1Q9UGP4 676 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 SORCS3Q9UPU3 1222 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 RBM8AQ9Y5S9 174 aaKnown RBP17.21■□□□□ 0.35
SF3A2-204ENST00000589118 HCFC2Q9Y5Z7 792 aa17.21■□□□□ 0.35
SF3A2-204ENST00000589118 IGKV6D-21A0A0A0MT36 114 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 CCDC69A6NI79 296 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 PROB1E7EW31 1015 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 ADAMTS3O15072 1205 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 GPR182O15218 404 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 CLASP2O75122 1294 aaKnown RBP17.2■□□□□ 0.34
SF3A2-204ENST00000589118 GPR32O75388 356 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 RPLP2P05387 115 aaKnown RBP17.2■□□□□ 0.34
SF3A2-204ENST00000589118 LAG3P18627 525 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 FGFR4P22455 802 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 RARS2Q5T160 578 aaKnown RBP17.2■□□□□ 0.34
SF3A2-204ENST00000589118 CASC1Q6TDU7 716 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 METTL13Q8N6R0 699 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
SF3A2-204ENST00000589118 PUF60Q9UHX1 559 aaKnown RBP17.2■□□□□ 0.34
SF3A2-204ENST00000589118 MYH9P35579 1960 aaKnown RBP17.2■□□□□ 0.34
SF3A2-204ENST00000589118 WDR81Q562E7 1941 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 RIF1Q5UIP0 2472 aaKnown RBP17.19■□□□□ 0.34
SF3A2-204ENST00000589118 PI15O43692 258 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 HBP1O60381 514 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 MTMR3Q13615 1198 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 CLLU1OSQ5K130 101 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 PDE12Q6L8Q7 609 aaKnown RBP17.19■□□□□ 0.34
SF3A2-204ENST00000589118 PDXDC2PQ6P474 469 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 RASGRP4Q8TDF6 673 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 MAP4K1Q92918 833 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 ZNF558Q96NG5 402 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 TMEM117Q9H0C3 514 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 ZNF302Q9NR11 478 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 LZTS1Q9Y250 596 aa17.19■□□□□ 0.34
SF3A2-204ENST00000589118 C2orf71A6NGG8 1288 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 MEIS1O00470 390 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 DHX15O43143 795 aaKnown RBP17.18■□□□□ 0.34
SF3A2-204ENST00000589118 SGSM2O43147 1006 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 C22orf31O95567 290 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 SRGAP2BP0DMP2 458 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 NBL1P41271 181 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 GNAQP50148 359 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 METAP2P50579 478 aaKnown RBP eCLIP17.18■□□□□ 0.34
SF3A2-204ENST00000589118 CLCN3P51790 818 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 CRYBB1P53674 252 aaPredicted RBP17.18■□□□□ 0.34
SF3A2-204ENST00000589118 LONRF3Q496Y0 759 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 CEP55Q53EZ4 464 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 MRPL43Q8N983 215 aaKnown RBP17.18■□□□□ 0.34
SF3A2-204ENST00000589118 TNPO1Q92973 898 aaKnown RBP17.18■□□□□ 0.34
SF3A2-204ENST00000589118 ANO3Q9BYT9 981 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 IRF2BPLQ9H1B7 796 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 ADAM7Q9H2U9 754 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 NR2E1Q9Y466 385 aa17.18■□□□□ 0.34
SF3A2-204ENST00000589118 FAM86B1E9PN63 330 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 CSDE1O75534 798 aaKnown RBP17.17■□□□□ 0.34
SF3A2-204ENST00000589118 FAM86B2P0C5J1 330 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 EPCAMP16422 314 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 HOXB8P17481 243 aaPredicted RBP17.17■□□□□ 0.34
SF3A2-204ENST00000589118 NAPAP54920 295 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 NLRP11P59045 1033 aaKnown RBP17.17■□□□□ 0.34
SF3A2-204ENST00000589118 ZNF484Q5JVG2 852 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 LRRC71Q8N4P6 559 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 FANCBQ8NB91 859 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 FLCNQ8NFG4 579 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 HELQQ8TDG4 1101 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 RUFY2Q8WXA3 655 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 CASP10Q92851 521 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 ELAC1Q9H777 363 aaKnown RBP17.17■□□□□ 0.34
SF3A2-204ENST00000589118 NGRNQ9NPE2 291 aaKnown RBP17.17■□□□□ 0.34
SF3A2-204ENST00000589118 SPG21Q9NZD8 308 aa17.17■□□□□ 0.34
SF3A2-204ENST00000589118 FAM186AA6NE01 2351 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 CXCL14O95715 111 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 ZNF76P36508 570 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 KRT17Q04695 432 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 FAM160B1Q5W0V3 765 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 ASTLQ6HA08 431 aaPredicted RBP17.16■□□□□ 0.34
SF3A2-204ENST00000589118 CES5AQ6NT32 575 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 TMEM173Q86WV6 379 aaPredicted RBP17.16■□□□□ 0.34
SF3A2-204ENST00000589118 PLA2G4DQ86XP0 818 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 ECHDC2Q86YB7 292 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 UBALD2Q8IYN6 164 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 ADSSL1Q8N142 457 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 SLC39A11Q8N1S5 342 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 RIC8AQ9NPQ8 531 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 SLC12A7Q9Y666 1083 aa17.16■□□□□ 0.34
SF3A2-204ENST00000589118 COL1A2P08123 1366 aa17.15■□□□□ 0.34
SF3A2-204ENST00000589118 MCM5P33992 734 aa17.15■□□□□ 0.34
SF3A2-204ENST00000589118 SLC26A2P50443 739 aa17.15■□□□□ 0.34
SF3A2-204ENST00000589118 SMC1AQ14683 1233 aaKnown RBP17.15■□□□□ 0.34
SF3A2-204ENST00000589118 TPRNQ4KMQ1 711 aa17.15■□□□□ 0.34
SF3A2-204ENST00000589118 JAKMIP3Q5VZ66 844 aa17.15■□□□□ 0.34
SF3A2-204ENST00000589118 CWF19L1Q69YN2 538 aaKnown RBP17.15■□□□□ 0.34
SF3A2-204ENST00000589118 ADAMTS10Q9H324 1103 aa17.15■□□□□ 0.34
SF3A2-204ENST00000589118 MFSD1Q9H3U5 465 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms