RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 IFNL1Q8IU54 200 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 DAW1Q8N136 415 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 SCFD2Q8WU76 684 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 FIZ1Q96SL8 496 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 KCNF1Q9H3M0 494 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 MLXIPQ9HAP2 919 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 SLC5A4Q9NY91 659 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 TAB2Q9NYJ8 693 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 CALUO43852 315 aaPredicted RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 DGAT1O75907 488 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 GNA14O95837 355 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 MYBP10242 640 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 CELF3Q5SZQ8 465 aaKnown RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 UTP14CQ5TAP6 766 aaKnown RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 PLA2G4FQ68DD2 849 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 CCDC62Q6P9F0 684 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 FBXO46Q6PJ61 603 aaPredicted RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 ZNF720Q7Z2F6 126 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 LRRC8AQ8IWT6 810 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 FBXO16Q8IX29 292 aaPredicted RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 NELFCDQ8IXH7 590 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 MSL3Q8N5Y2 521 aaKnown RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 MCPH1Q8NEM0 835 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 SEPT1Q8WYJ6 367 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 CEP170P1Q96L14 293 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 TUBGCP2Q9BSJ2 902 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 C17orf75Q9HAS0 396 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 TYW1Q9NV66 732 aaKnown RBP13.31□□□□□ -0.28
CCBE1-203ENST00000589116 PCDHB13Q9Y5F0 798 aa13.31□□□□□ -0.28
CCBE1-203ENST00000589116 GSTTP1A0A1W2PQM5 241 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 SFI1A8K8P3 1242 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 NRDCO43847 1150 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 ARIH2O95376 493 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 PLS3P13797 630 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 SFPQP23246 707 aaKnown RBP eCLIP13.3□□□□□ -0.28
CCBE1-203ENST00000589116 MTIF2P46199 727 aaKnown RBP13.3□□□□□ -0.28
CCBE1-203ENST00000589116 TBX2Q13207 712 aaPredicted RBP13.3□□□□□ -0.28
CCBE1-203ENST00000589116 NFIL3Q16649 462 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 LY6KQ17RY6 165 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 DPP9Q86TI2 863 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 CACTINQ8WUQ7 758 aaKnown RBP13.3□□□□□ -0.28
CCBE1-203ENST00000589116 KIFAP3Q92845 792 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 VPS16Q9H269 839 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 ST6GALNAC4Q9H4F1 302 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
CCBE1-203ENST00000589116 PPME1Q9Y570 386 aa13.3□□□□□ -0.28
CCBE1-203ENST00000589116 A0A1W2PQC6 194 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 RBM47A0AV96 593 aaKnown RBP13.29□□□□□ -0.28
CCBE1-203ENST00000589116 TEX33O43247 280 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 TLR2O60603 784 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 PPP1R37O75864 691 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 PRPF6O94906 941 aaKnown RBP13.29□□□□□ -0.28
CCBE1-203ENST00000589116 OATP04181 439 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 TXNP10599 105 aaKnown RBP13.29□□□□□ -0.28
CCBE1-203ENST00000589116 DNM2P50570 870 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 NPEPPSP55786 919 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 MARSP56192 900 aaKnown RBP13.29□□□□□ -0.28
CCBE1-203ENST00000589116 RTP1P59025 263 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 IRF5Q13568 498 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 TRIM14Q14142 442 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 ZNF296Q8WUU4 475 aaPredicted RBP13.29□□□□□ -0.28
CCBE1-203ENST00000589116 FAM167AQ96KS9 214 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 ZNF830Q96NB3 372 aaPredicted RBP13.29□□□□□ -0.28
CCBE1-203ENST00000589116 STRA6Q9BX79 667 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 CYP26B1Q9NR63 512 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 CPA4Q9UI42 421 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 TELO2Q9Y4R8 837 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 EMSYQ7Z589 1322 aa13.29□□□□□ -0.28
CCBE1-203ENST00000589116 TMEM150BA6NC51 233 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 K7ENM7 598 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
CCBE1-203ENST00000589116 CETN3O15182 167 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 SORBS3O60504 671 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 LGR5O75473 907 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 PRKCSHP14314 528 aaPredicted RBP13.28□□□□□ -0.28
CCBE1-203ENST00000589116 RPL13P26373 211 aaKnown RBP13.28□□□□□ -0.28
CCBE1-203ENST00000589116 NMT1P30419 496 aaKnown RBP13.28□□□□□ -0.28
CCBE1-203ENST00000589116 HOXD13P35453 343 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 TCF7P36402 384 aaPredicted RBP13.28□□□□□ -0.28
CCBE1-203ENST00000589116 STAT5BP51692 787 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 MAN2A1Q16706 1144 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 C17orf99Q6UX52 265 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 CREBRFQ8IUR6 639 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 DHX37Q8IY37 1157 aaKnown RBP13.28□□□□□ -0.28
CCBE1-203ENST00000589116 CCDC112Q8NEF3 446 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 GOLGA5Q8TBA6 731 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 MAML3Q96JK9 1138 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 GPR20Q99678 358 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 NIFKQ9BYG3 293 aaKnown RBP13.28□□□□□ -0.28
CCBE1-203ENST00000589116 AZI2Q9H6S1 392 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 ATP6V0A4Q9HBG4 840 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 ZFYVE28Q9HCC9 887 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 PDLIM7Q9NR12 457 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.28□□□□□ -0.28
CCBE1-203ENST00000589116 KCNG1Q9UIX4 513 aa13.28□□□□□ -0.28
CCBE1-203ENST00000589116 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms