RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 IL23AQ9NPF7 189 aa22.47■■□□□ 1.19
ATG4D-208ENST00000588667 MORC2Q9Y6X9 1032 aaPredicted RBP22.47■■□□□ 1.19
ATG4D-208ENST00000588667 PFKMP08237 780 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 CCT6AP40227 531 aaKnown RBP22.46■■□□□ 1.19
ATG4D-208ENST00000588667 FAM26DQ5JW98 314 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 KRT79Q5XKE5 535 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 METTL13Q8N6R0 699 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 CEP170P1Q96L14 293 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 AK8Q96MA6 479 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 SH2D3AQ9BRG2 576 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 ANKEF1Q9NU02 776 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 TMEM63CQ9P1W3 806 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 XRCC6P12956 609 aaKnown RBP eCLIP22.46■■□□□ 1.19
ATG4D-208ENST00000588667 EPHB4P54760 987 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 NPEPPSP55786 919 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 POTEGQ6S5H5 508 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 RPUSD2Q8IZ73 545 aaKnown RBP22.46■■□□□ 1.19
ATG4D-208ENST00000588667 KIAA0319LQ8IZA0 1049 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 NME8Q8N427 588 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 LINC01465Q8N7H1 131 aa22.46■■□□□ 1.19
ATG4D-208ENST00000588667 COLQQ9Y215 455 aaPredicted RBP22.46■■□□□ 1.19
ATG4D-208ENST00000588667 PP2D1A8MPX8 630 aa22.45■■□□□ 1.18
ATG4D-208ENST00000588667 ZBTB39O15060 712 aa22.45■■□□□ 1.18
ATG4D-208ENST00000588667 TMOD1P28289 359 aa22.45■■□□□ 1.18
ATG4D-208ENST00000588667 MARCKSP29966 332 aaPredicted RBP22.45■■□□□ 1.18
ATG4D-208ENST00000588667 LONP1P36776 959 aaKnown RBP22.45■■□□□ 1.18
ATG4D-208ENST00000588667 MRPS6P82932 125 aaKnown RBP22.45■■□□□ 1.18
ATG4D-208ENST00000588667 GSE1Q14687 1217 aa22.45■■□□□ 1.18
ATG4D-208ENST00000588667 XKR9Q5GH70 373 aa22.45■■□□□ 1.18
ATG4D-208ENST00000588667 EFCAB12Q6NXP0 572 aa22.45■■□□□ 1.18
ATG4D-208ENST00000588667 PSRC1Q6PGN9 363 aaPredicted RBP22.45■■□□□ 1.18
ATG4D-208ENST00000588667 EXOC8Q8IYI6 725 aa22.45■■□□□ 1.18
ATG4D-208ENST00000588667 CCDC43Q96MW1 224 aaKnown RBP22.45■■□□□ 1.18
ATG4D-208ENST00000588667 NACC1Q96RE7 527 aa22.45■■□□□ 1.18
ATG4D-208ENST00000588667 JPH2Q9BR39 696 aaPredicted RBP22.45■■□□□ 1.18
ATG4D-208ENST00000588667 LAMA3Q16787 3333 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 IGKV6-21A0A0C4DH24 114 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 M0QZ92 97 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 MAFO75444 373 aaPredicted RBP22.44■■□□□ 1.18
ATG4D-208ENST00000588667 RFC5P40937 340 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 CLCN3P51790 818 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 MGAT3Q09327 533 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 MBTPS1Q14703 1052 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 CCDC183Q5T5S1 534 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 IER5Q5VY09 327 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 CCDC73Q6ZRK6 1079 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 LRRC71Q8N4P6 559 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 KRI1Q8N9T8 703 aaKnown RBP22.44■■□□□ 1.18
ATG4D-208ENST00000588667 PIGOQ8TEQ8 1089 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 SLC7A3Q8WY07 619 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 VWCEQ96DN2 955 aa22.44■■□□□ 1.18
ATG4D-208ENST00000588667 MMTAG2Q9BU76 263 aaKnown RBP22.44■■□□□ 1.18
ATG4D-208ENST00000588667 A0A1W2PPC1 479 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 CUTAO60888 179 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 NBNO60934 754 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 CHRNA1P02708 482 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 CXCL10P02778 98 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 ACRP10323 421 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 CDC25AP30304 524 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 RARRES1P49788 294 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 GPNMBQ14956 572 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 ZSCAN23Q3MJ62 389 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 C16orf59Q7L2K0 433 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 DEFB128Q7Z7B8 93 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 ZNF579Q8NAF0 562 aaKnown RBP22.43■■□□□ 1.18
ATG4D-208ENST00000588667 MRPS27Q92552 414 aaKnown RBP22.43■■□□□ 1.18
ATG4D-208ENST00000588667 MAP7D2Q96T17 732 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 DHX33Q9H6R0 707 aaKnown RBP22.43■■□□□ 1.18
ATG4D-208ENST00000588667 SUGCTQ9HAC7 445 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 FBXO2Q9UK22 296 aaPredicted RBP22.43■■□□□ 1.18
ATG4D-208ENST00000588667 DBR1Q9UK59 544 aaKnown RBP22.43■■□□□ 1.18
ATG4D-208ENST00000588667 SRPRBQ9Y5M8 271 aaKnown RBP22.43■■□□□ 1.18
ATG4D-208ENST00000588667 CDY2AQ9Y6F7 541 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 KDM3AQ9Y4C1 1321 aa22.43■■□□□ 1.18
ATG4D-208ENST00000588667 LIG1P18858 919 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 POLGP54098 1239 aaPredicted RBP22.42■■□□□ 1.18
ATG4D-208ENST00000588667 GRIN1Q05586 938 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 ECM1Q16610 540 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 TMEM240Q5SV17 173 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 AXDND1Q5T1B0 1012 aaPredicted RBP22.42■■□□□ 1.18
ATG4D-208ENST00000588667 TDHQ8IZJ6 230 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 FSIP1Q8NA03 581 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.42■■□□□ 1.18
ATG4D-208ENST00000588667 DDX19AQ9NUU7 478 aaKnown RBP22.42■■□□□ 1.18
ATG4D-208ENST00000588667 TRPV2Q9Y5S1 764 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 SLC26A4O43511 780 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 GAS2O43903 313 aaKnown RBP22.42■■□□□ 1.18
ATG4D-208ENST00000588667 CMA1P23946 247 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 TMEM62Q0P6H9 643 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 HYIQ5T013 277 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 ZNF710Q8N1W2 664 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 KIAA1024Q9UPX6 916 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 AKT3Q9Y243 479 aa22.42■■□□□ 1.18
ATG4D-208ENST00000588667 LETM1O95202 739 aaPredicted RBP22.41■■□□□ 1.18
ATG4D-208ENST00000588667 DNM2P50570 870 aa22.41■■□□□ 1.18
ATG4D-208ENST00000588667 EMC2Q15006 297 aa22.41■■□□□ 1.18
ATG4D-208ENST00000588667 ZNF365Q70YC5 407 aa22.41■■□□□ 1.18
ATG4D-208ENST00000588667 KCTD17Q8N5Z5 321 aa22.41■■□□□ 1.18
ATG4D-208ENST00000588667 CELF4Q9BZC1 486 aaKnown RBP22.41■■□□□ 1.18
ATG4D-208ENST00000588667 NT5C3AQ9H0P0 336 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms