RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 DRC1Q96MC2 740 aa28.78■■■□□ 2.2
SCAMP4-210ENST00000588555 KCTD10Q9H3F6 313 aa28.78■■■□□ 2.2
SCAMP4-210ENST00000588555 GPRC5CQ9NQ84 441 aa28.78■■■□□ 2.2
SCAMP4-210ENST00000588555 XPNPEP1Q9NQW7 623 aa28.78■■■□□ 2.2
SCAMP4-210ENST00000588555 IFNKQ9P0W0 207 aa28.78■■■□□ 2.2
SCAMP4-210ENST00000588555 KIF20AO95235 890 aa28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 NMT1P30419 496 aaKnown RBP28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 HOXD13P35453 343 aa28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 SP3Q02447 781 aa28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 LRRC63Q05C16 580 aa28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 APTXQ7Z2E3 356 aaKnown RBP28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 AFG1LQ8WV93 481 aa28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 GLG1Q92896 1179 aa28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 NRBP2Q9NSY0 501 aa28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 LARSQ9P2J5 1176 aaKnown RBP28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 GABRQQ9UN88 632 aa28.77■■■□□ 2.2
SCAMP4-210ENST00000588555 TRPA1O75762 1119 aa28.76■■■□□ 2.19
SCAMP4-210ENST00000588555 PLS3P13797 630 aa28.76■■■□□ 2.19
SCAMP4-210ENST00000588555 ZNF720Q7Z2F6 126 aa28.76■■■□□ 2.19
SCAMP4-210ENST00000588555 FAM178BQ8IXR5 827 aa28.76■■■□□ 2.19
SCAMP4-210ENST00000588555 CSGALNACT2Q8N6G5 542 aa28.76■■■□□ 2.19
SCAMP4-210ENST00000588555 ZNF507Q8TCN5 953 aa28.76■■■□□ 2.19
SCAMP4-210ENST00000588555 FAM167AQ96KS9 214 aa28.76■■■□□ 2.19
SCAMP4-210ENST00000588555 XPO4Q9C0E2 1151 aaKnown RBP28.76■■■□□ 2.19
SCAMP4-210ENST00000588555 EIF3DO15371 548 aaKnown RBP eCLIP28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 GCNT3O95395 438 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 SLC26A2P50443 739 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 TNFAIP2Q03169 654 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 NELFCDQ8IXH7 590 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 MCPH1Q8NEM0 835 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 STRA6Q9BX79 667 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 SRRTQ9BXP5 876 aaKnown RBP28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 SMARCAD1Q9H4L7 1026 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 THAP9Q9H5L6 903 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 DHX33Q9H6R0 707 aaKnown RBP28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 HOXD8P13378 290 aaPredicted RBP28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 CDK11BP21127 795 aaKnown RBP28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 CDC25BP30305 580 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 FAM102BQ5T8I3 360 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 ATP8B4Q8TF62 1192 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 BBXQ8WY36 941 aaPredicted RBP28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 ATP6V0A4Q9HBG4 840 aa28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 GNEQ9Y223 722 aaKnown RBP28.75■■■□□ 2.19
SCAMP4-210ENST00000588555 PPP1R37O75864 691 aa28.74■■■□□ 2.19
SCAMP4-210ENST00000588555 PRPF6O94906 941 aaKnown RBP28.74■■■□□ 2.19
SCAMP4-210ENST00000588555 SERPINC1P01008 464 aa28.74■■■□□ 2.19
SCAMP4-210ENST00000588555 MAPTP10636 758 aaKnown RBP28.74■■■□□ 2.19
SCAMP4-210ENST00000588555 FLT3LGP49771 235 aa28.74■■■□□ 2.19
SCAMP4-210ENST00000588555 PLCB4Q15147 1175 aa28.74■■■□□ 2.19
SCAMP4-210ENST00000588555 NOC3LQ8WTT2 800 aaKnown RBP28.74■■■□□ 2.19
SCAMP4-210ENST00000588555 LGALS2P05162 132 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 MARK3P27448 753 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 PRKCZQ05513 592 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 KNOP1Q1ED39 458 aaKnown RBP28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 KIFAP3Q92845 792 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 NAP1L5Q96NT1 182 aaPredicted RBP28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 CASP8AP2Q9UKL3 1982 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 SOX10P56693 466 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 UBASH3AP57075 661 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 KCNA1Q09470 495 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 EMC2Q15006 297 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 ZC2HC1CQ53FD0 456 aaPredicted RBP28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 OR6J1Q8NGC5 347 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 PPME1Q9Y570 386 aa28.73■■■□□ 2.19
SCAMP4-210ENST00000588555 UBE4BO95155 1302 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 ZBTB42B2RXF5 422 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 PPFIA4O75335 1185 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 POLGP54098 1239 aaPredicted RBP28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 RTP1P59025 263 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 SPAG1Q07617 926 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 TCP11X2Q5H9J9 407 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 LRRC55Q6ZSA7 311 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 TRIB2Q92519 343 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 TSG101Q99816 390 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 INTS13Q9NVM9 706 aa28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 LIMA1Q9UHB6 759 aaKnown RBP28.72■■■□□ 2.19
SCAMP4-210ENST00000588555 ZMYM2Q9UBW7 1377 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 LRRC10BA6NIK2 292 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 KCNJ18B7U540 433 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 MMP3P08254 477 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 RFC5P40937 340 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 KCNJ12Q14500 433 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 EEF2KMTQ96G04 330 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 ST6GALNAC4Q9H4F1 302 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 C17orf75Q9HAS0 396 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 ERAP1Q9NZ08 941 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 TRAF3IP3Q9Y228 551 aa28.71■■■□□ 2.19
SCAMP4-210ENST00000588555 NCKAP1LP55160 1127 aa28.7■■■□□ 2.19
SCAMP4-210ENST00000588555 KIF22Q14807 665 aa28.7■■■□□ 2.19
SCAMP4-210ENST00000588555 PPP4R3CPQ6ZMV5 832 aa28.7■■■□□ 2.19
SCAMP4-210ENST00000588555 BSNDQ8WZ55 320 aa28.7■■■□□ 2.19
SCAMP4-210ENST00000588555 C16orf70Q9BSU1 422 aa28.7■■■□□ 2.19
SCAMP4-210ENST00000588555 NRBP1Q9UHY1 535 aa28.7■■■□□ 2.19
SCAMP4-210ENST00000588555 PCDHB13Q9Y5F0 798 aa28.7■■■□□ 2.19
SCAMP4-210ENST00000588555 PDXKO00764 312 aa28.7■■■□□ 2.18
SCAMP4-210ENST00000588555 CBFA2T2O43439 604 aa28.7■■■□□ 2.18
SCAMP4-210ENST00000588555 PEX3P56589 373 aa28.7■■■□□ 2.18
SCAMP4-210ENST00000588555 KRT31Q15323 416 aa28.7■■■□□ 2.18
SCAMP4-210ENST00000588555 ZC3H3Q8IXZ2 948 aaKnown RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms