RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 POTEGQ6S5H5 508 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 USP28Q96RU2 1077 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 MMTAG2Q9BU76 263 aaKnown RBP22.58■■□□□ 1.21
DDX39A-207ENST00000588542 CELF4Q9BZC1 486 aaKnown RBP22.58■■□□□ 1.21
DDX39A-207ENST00000588542 DHX33Q9H6R0 707 aaKnown RBP22.58■■□□□ 1.21
DDX39A-207ENST00000588542 SUGCTQ9HAC7 445 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 CDHR5Q9HBB8 845 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 PPME1Q9Y570 386 aa22.58■■□□□ 1.21
DDX39A-207ENST00000588542 F13A1P00488 732 aa22.57■■□□□ 1.2
DDX39A-207ENST00000588542 XRCC6P12956 609 aaKnown RBP eCLIP22.57■■□□□ 1.2
DDX39A-207ENST00000588542 MUTP22033 750 aa22.57■■□□□ 1.2
DDX39A-207ENST00000588542 TMOD1P28289 359 aa22.57■■□□□ 1.2
DDX39A-207ENST00000588542 CCT6AP40227 531 aaKnown RBP22.57■■□□□ 1.2
DDX39A-207ENST00000588542 LPIN1Q14693 890 aa22.57■■□□□ 1.2
DDX39A-207ENST00000588542 HAUS3Q68CZ6 603 aa22.57■■□□□ 1.2
DDX39A-207ENST00000588542 DBF4BQ8NFT6 615 aa22.57■■□□□ 1.2
DDX39A-207ENST00000588542 SZT2Q5T011 3432 aa22.57■■□□□ 1.2
DDX39A-207ENST00000588542 GPR32O75388 356 aa22.56■■□□□ 1.2
DDX39A-207ENST00000588542 GHRP10912 638 aa22.56■■□□□ 1.2
DDX39A-207ENST00000588542 RARRES1P49788 294 aa22.56■■□□□ 1.2
DDX39A-207ENST00000588542 GRIN1Q05586 938 aa22.56■■□□□ 1.2
DDX39A-207ENST00000588542 SNX29Q8TEQ0 813 aa22.56■■□□□ 1.2
DDX39A-207ENST00000588542 AKT3Q9Y243 479 aa22.56■■□□□ 1.2
DDX39A-207ENST00000588542 ZDHHC9Q9Y397 364 aa22.56■■□□□ 1.2
DDX39A-207ENST00000588542 STK24Q9Y6E0 443 aa22.56■■□□□ 1.2
DDX39A-207ENST00000588542 M0QZ92 97 aa22.55■■□□□ 1.2
DDX39A-207ENST00000588542 SOX1O00570 391 aaPredicted RBP22.55■■□□□ 1.2
DDX39A-207ENST00000588542 ACTN1P12814 892 aa22.55■■□□□ 1.2
DDX39A-207ENST00000588542 RFC5P40937 340 aa22.55■■□□□ 1.2
DDX39A-207ENST00000588542 CEBPZQ03701 1054 aaKnown RBP22.55■■□□□ 1.2
DDX39A-207ENST00000588542 KIZQ2M2Z5 673 aa22.55■■□□□ 1.2
DDX39A-207ENST00000588542 NACC1Q96RE7 527 aa22.55■■□□□ 1.2
DDX39A-207ENST00000588542 MAP7D2Q96T17 732 aa22.55■■□□□ 1.2
DDX39A-207ENST00000588542 PPP1R16BQ96T49 567 aa22.55■■□□□ 1.2
DDX39A-207ENST00000588542 JPH2Q9BR39 696 aaPredicted RBP22.55■■□□□ 1.2
DDX39A-207ENST00000588542 ADAMTS10Q9H324 1103 aa22.55■■□□□ 1.2
DDX39A-207ENST00000588542 AGO3Q9H9G7 860 aaKnown RBP22.55■■□□□ 1.2
DDX39A-207ENST00000588542 DBR1Q9UK59 544 aaKnown RBP22.55■■□□□ 1.2
DDX39A-207ENST00000588542 SQORQ9Y6N5 450 aa22.55■■□□□ 1.2
DDX39A-207ENST00000588542 BAIAP3O94812 1187 aa22.54■■□□□ 1.2
DDX39A-207ENST00000588542 POLGP54098 1239 aaPredicted RBP22.54■■□□□ 1.2
DDX39A-207ENST00000588542 KRT79Q5XKE5 535 aa22.54■■□□□ 1.2
DDX39A-207ENST00000588542 FAM109BQ6ICB4 259 aaPredicted RBP22.54■■□□□ 1.2
DDX39A-207ENST00000588542 TSHZ1Q6ZSZ6 1077 aa22.54■■□□□ 1.2
DDX39A-207ENST00000588542 TMEM40Q8WWA1 233 aa22.54■■□□□ 1.2
DDX39A-207ENST00000588542 SLC7A3Q8WY07 619 aa22.54■■□□□ 1.2
DDX39A-207ENST00000588542 IFIH1Q9BYX4 1025 aaKnown RBP22.54■■□□□ 1.2
DDX39A-207ENST00000588542 XPNPEP1Q9NQW7 623 aa22.54■■□□□ 1.2
DDX39A-207ENST00000588542 BMP2KQ9NSY1 1161 aaPredicted RBP22.54■■□□□ 1.2
DDX39A-207ENST00000588542 KIAA1024Q9UPX6 916 aa22.54■■□□□ 1.2
DDX39A-207ENST00000588542 MORC2Q9Y6X9 1032 aaPredicted RBP22.54■■□□□ 1.2
DDX39A-207ENST00000588542 TCHHQ07283 1943 aa22.54■■□□□ 1.2
DDX39A-207ENST00000588542 ZBBXA8MT70 800 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 BRD1O95696 1058 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 MARCKSP29966 332 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-207ENST00000588542 NASPP49321 788 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-207ENST00000588542 GPC3P51654 580 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 CRYBB1P53674 252 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-207ENST00000588542 NLRP11P59045 1033 aaKnown RBP22.53■■□□□ 1.2
DDX39A-207ENST00000588542 EMC2Q15006 297 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 SLC39A14Q15043 492 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 HYIQ5T013 277 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 EXOC8Q8IYI6 725 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 SEPT8Q92599 483 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 AK8Q96MA6 479 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 MTIF3Q9H2K0 278 aaKnown RBP22.53■■□□□ 1.2
DDX39A-207ENST00000588542 DDX19AQ9NUU7 478 aaKnown RBP22.53■■□□□ 1.2
DDX39A-207ENST00000588542 SUCLA2Q9P2R7 463 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-207ENST00000588542 TFIP11Q9UBB9 837 aaKnown RBP22.53■■□□□ 1.2
DDX39A-207ENST00000588542 FBXO2Q9UK22 296 aaPredicted RBP22.53■■□□□ 1.2
DDX39A-207ENST00000588542 GINS2Q9Y248 185 aa22.53■■□□□ 1.2
DDX39A-207ENST00000588542 CD52P31358 61 aa22.52■■□□□ 1.2
DDX39A-207ENST00000588542 LONP1P36776 959 aaKnown RBP22.52■■□□□ 1.2
DDX39A-207ENST00000588542 DNM2P50570 870 aa22.52■■□□□ 1.2
DDX39A-207ENST00000588542 FXR1P51114 621 aaKnown RBP eCLIP22.52■■□□□ 1.2
DDX39A-207ENST00000588542 WDR5P61964 334 aaKnown RBP22.52■■□□□ 1.2
DDX39A-207ENST00000588542 IKBKEQ14164 716 aa22.52■■□□□ 1.2
DDX39A-207ENST00000588542 USP38Q8NB14 1042 aa22.52■■□□□ 1.2
DDX39A-207ENST00000588542 TMEM143Q96AN5 459 aa22.52■■□□□ 1.2
DDX39A-207ENST00000588542 ZNF668Q96K58 619 aaPredicted RBP22.52■■□□□ 1.2
DDX39A-207ENST00000588542 ZNF396Q96N95 335 aaPredicted RBP22.52■■□□□ 1.2
DDX39A-207ENST00000588542 PNMA5Q96PV4 448 aa22.52■■□□□ 1.2
DDX39A-207ENST00000588542 OSMRQ99650 979 aa22.52■■□□□ 1.2
DDX39A-207ENST00000588542 NOC2LQ9Y3T9 749 aaKnown RBP22.52■■□□□ 1.2
DDX39A-207ENST00000588542 SRPRBQ9Y5M8 271 aaKnown RBP22.52■■□□□ 1.2
DDX39A-207ENST00000588542 SLC4A7Q9Y6M7 1214 aa22.52■■□□□ 1.2
DDX39A-207ENST00000588542 ABHD14A-ACY1A0A1B0GW23 586 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 GAS2O43903 313 aaKnown RBP22.51■■□□□ 1.19
DDX39A-207ENST00000588542 DGAT1O75907 488 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 GRB10Q13322 594 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 FOXD4L6Q3SYB3 417 aaPredicted RBP22.51■■□□□ 1.19
DDX39A-207ENST00000588542 FOXD4L3Q6VB84 417 aaPredicted RBP22.51■■□□□ 1.19
DDX39A-207ENST00000588542 KCNK18Q7Z418 384 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 ZNF710Q8N1W2 664 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 LINC00301Q8NCQ3 95 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 APBB2Q92870 758 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 LRCH3Q96II8 777 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 MTRQ99707 1265 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 PADI3Q9ULW8 664 aa22.51■■□□□ 1.19
DDX39A-207ENST00000588542 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms