RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PPP1R16BQ96T49 567 aa15.71■□□□□ 0.11
CLPTM1-208ENST00000588274 ELAC1Q9H777 363 aaKnown RBP15.71■□□□□ 0.11
CLPTM1-208ENST00000588274 GINS2Q9Y248 185 aa15.71■□□□□ 0.11
CLPTM1-208ENST00000588274 LZTS1Q9Y250 596 aa15.71■□□□□ 0.11
CLPTM1-208ENST00000588274 PCDHB7Q9Y5E2 793 aa15.71■□□□□ 0.11
CLPTM1-208ENST00000588274 PCDHB12Q9Y5F1 795 aa15.71■□□□□ 0.11
CLPTM1-208ENST00000588274 EVPLQ92817 2033 aa15.71■□□□□ 0.11
CLPTM1-208ENST00000588274 PLXNA3P51805 1871 aa15.71■□□□□ 0.11
CLPTM1-208ENST00000588274 hCG_1984214I3L0E3 225 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 VTNP04004 478 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 CYP3A4P08684 503 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 CDC27P30260 824 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 PBX3P40426 434 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 CRYBB1P53674 252 aaPredicted RBP15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 PTPN5P54829 565 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 ZNF484Q5JVG2 852 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 ANKRD54Q6NXT1 300 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 ZNF713Q8N859 430 aaPredicted RBP15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 MRPS27Q92552 414 aaKnown RBP15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 LENG9Q96B70 501 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 ADAMTS10Q9H324 1103 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 ZNF302Q9NR11 478 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 RBM28Q9NW13 759 aaKnown RBP15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 DCHS1Q96JQ0 3298 aa15.7■□□□□ 0.1
CLPTM1-208ENST00000588274 WDR81Q562E7 1941 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 DENND3A2RUS2 1198 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 SMCO2A6NFE2 343 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 IPO5O00410 1097 aaKnown RBP15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 BACH1O14867 736 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 GPR182O15218 404 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 EDIL3O43854 480 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 PDGFBP01127 241 aaPredicted RBP15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 LAG3P18627 525 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 IBSPP21815 317 aaPredicted RBP15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 PKN1Q16512 942 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 ADCK5Q3MIX3 580 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 PLPP4Q5VZY2 271 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 PDE12Q6L8Q7 609 aaKnown RBP15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 SWSAP1Q6NVH7 229 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 PDXDC2PQ6P474 469 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 THNSL1Q8IYQ7 743 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 YTHDC1Q96MU7 727 aaKnown RBP15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 NEK1Q96PY6 1258 aa15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 V9GY48 417 aaPredicted RBP15.69■□□□□ 0.1
CLPTM1-208ENST00000588274 NID2Q14112 1375 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 FSD2A1L4K1 749 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 CLCN3P51790 818 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 RTN1Q16799 776 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 CLLU1OSQ5K130 101 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 FAM160B1Q5W0V3 765 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 ZNF598Q86UK7 904 aaKnown RBP15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 PLA2G4DQ86XP0 818 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 RASEFQ8IZ41 740 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 BBXQ8WY36 941 aaPredicted RBP15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 TCF25Q9BQ70 676 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 TMEM117Q9H0C3 514 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 AAASQ9NRG9 546 aa15.68■□□□□ 0.1
CLPTM1-208ENST00000588274 DENND4AQ7Z401 1863 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 ZFHX2Q9C0A1 2572 aaPredicted RBP15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 ESYT2A0FGR8 921 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 ZNF862O60290 1169 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 TECP42680 631 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 ZNF746Q6NUN9 644 aaPredicted RBP15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 MIS18BP1Q6P0N0 1132 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 KCNT2Q6UVM3 1135 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 SUGP1Q8IWZ8 645 aaKnown RBP15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 FEZF2Q8TBJ5 459 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 MICAL1Q8TDZ2 1067 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 PRRX2Q99811 253 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 ATP6V0A4Q9HBG4 840 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 ANO2Q9NQ90 1003 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 FAM86C1Q9NVL1 165 aa15.67■□□□□ 0.1
CLPTM1-208ENST00000588274 ZBTB43O43298 467 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 AVPR2P30518 371 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 RCAN1P53805 252 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 PFKFB3Q16875 520 aaPredicted RBP15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 TSGA10IPQ3SY00 556 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 SPOUT1Q5T280 376 aaKnown RBP15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 JAKMIP3Q5VZ66 844 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 ECHDC2Q86YB7 292 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 SLC39A11Q8N1S5 342 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 LRRC43Q8N309 656 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 SNX27Q96L92 541 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 APOL5Q9BWW9 433 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 ZMYND12Q9H0C1 365 aa15.66■□□□□ 0.1
CLPTM1-208ENST00000588274 GOLGA8AA7E2F4 631 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 GOLGA8BA8MQT2 603 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 CIITAP33076 1130 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 SETQ01105 290 aaPredicted RBP15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 UGCGQ16739 394 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 ODR4Q5SWX8 454 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 LLGL2Q6P1M3 1020 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 DHX32Q7L7V1 743 aaKnown RBP15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 TMEM173Q86WV6 379 aaPredicted RBP15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 SMAP1Q8IYB5 467 aaPredicted RBP15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 LRRC71Q8N4P6 559 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 CEP89Q96ST8 783 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 ZNF577Q9BSK1 485 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 SMOC2Q9H3U7 446 aa15.65■□□□□ 0.1
CLPTM1-208ENST00000588274 POMKQ9H5K3 350 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms