RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 ADAM7Q9H2U9 754 aa17.86■□□□□ 0.45
RANBP3-209ENST00000587411 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.86■□□□□ 0.45
RANBP3-209ENST00000587411 AFF2P51816 1311 aa17.86■□□□□ 0.45
RANBP3-209ENST00000587411 CALUO43852 315 aaPredicted RBP17.86■□□□□ 0.45
RANBP3-209ENST00000587411 SHBGP04278 402 aa17.86■□□□□ 0.45
RANBP3-209ENST00000587411 KLRC3Q07444 240 aa17.86■□□□□ 0.45
RANBP3-209ENST00000587411 LRRC34Q8IZ02 419 aa17.86■□□□□ 0.45
RANBP3-209ENST00000587411 GOPCQ9HD26 462 aa17.86■□□□□ 0.45
RANBP3-209ENST00000587411 TRPC6Q9Y210 931 aa17.86■□□□□ 0.45
RANBP3-209ENST00000587411 GTPBP10A4D1E9 387 aaKnown RBP17.85■□□□□ 0.45
RANBP3-209ENST00000587411 SPDYE3A6NKU9 549 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 DDX3YO15523 660 aaKnown RBP17.85■□□□□ 0.45
RANBP3-209ENST00000587411 TMEM253P0C7T8 217 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 LMNB1P20700 586 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 GALCP54803 685 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 KNOP1Q1ED39 458 aaKnown RBP17.85■□□□□ 0.45
RANBP3-209ENST00000587411 BTNL9Q6UXG8 535 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 DNAAF5Q86Y56 855 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 TBC1D22AQ8WUA7 517 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 SIX2Q9NPC8 291 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 DOT1LQ8TEK3 1739 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 NPHP3-ACAD11A0A0J9YXS1 232 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 SLC16A3O15427 465 aaKnown RBP17.85■□□□□ 0.45
RANBP3-209ENST00000587411 RTN2O75298 545 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 CLK2P49760 499 aaKnown RBP17.85■□□□□ 0.45
RANBP3-209ENST00000587411 KIAA1755Q5JYT7 1200 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 TCP11Q8WWU5 503 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 FAXDC2Q96IV6 333 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 TRIM6Q9C030 488 aaPredicted RBP17.85■□□□□ 0.45
RANBP3-209ENST00000587411 TAF1P21675 1872 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 IRS2Q9Y4H2 1338 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 PDXKO00764 312 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 STAT1P42224 750 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 ZNF268Q14587 947 aaPredicted RBP17.85■□□□□ 0.45
RANBP3-209ENST00000587411 TBC1D31Q96DN5 1066 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 PARP2Q9UGN5 583 aa17.85■□□□□ 0.45
RANBP3-209ENST00000587411 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
RANBP3-209ENST00000587411 PPATQ06203 517 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 NAA25Q14CX7 972 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 DIXDC1Q155Q3 683 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 JAMLQ86YT9 394 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 SLC30A5Q8TAD4 765 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 RNF25Q96BH1 459 aaPredicted RBP17.84■□□□□ 0.45
RANBP3-209ENST00000587411 ELAC2Q9BQ52 826 aaKnown RBP17.84■□□□□ 0.45
RANBP3-209ENST00000587411 AZI2Q9H6S1 392 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 SLAIN2Q9P270 581 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 CCDC189A1A4V9 331 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 CLTAP09496 248 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 HSPA6P17066 643 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 RPL13P26373 211 aaKnown RBP17.84■□□□□ 0.45
RANBP3-209ENST00000587411 MAPK7Q13164 816 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 PLS1Q14651 629 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 DCAF17Q5H9S7 520 aaPredicted RBP17.84■□□□□ 0.45
RANBP3-209ENST00000587411 TXNRD3Q86VQ6 643 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 SLC35G2Q8TBE7 412 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 DHX36Q9H2U1 1008 aaKnown RBP17.84■□□□□ 0.45
RANBP3-209ENST00000587411 ZHX3Q9H4I2 956 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 GCNT4Q9P109 453 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 C15orf41Q9Y2V0 281 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 NR2E1Q9Y466 385 aa17.84■□□□□ 0.45
RANBP3-209ENST00000587411 PNMA6FA0A0J9YX94 578 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 POTEB3A0JP26 581 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 TLDC2A0PJX2 215 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 POTECB2RU33 542 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 KIAA0391O15091 583 aaKnown RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 PPP1R12BO60237 982 aaPredicted RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 VIMP08670 466 aaKnown RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 ALADP13716 330 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 PDE6CP51160 858 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 SLC12A3P55017 1021 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 PLTPP55058 493 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 PRPF4BQ13523 1007 aaKnown RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 ACCSLQ4AC99 568 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 DCAF12L1Q5VU92 463 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 POTEBQ6S5H4 581 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 ZDHHC24Q6UX98 284 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 TAOK1Q7L7X3 1001 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 PNMA8AQ86V59 439 aaPredicted RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 CTNNBL1Q8WYA6 563 aaPredicted RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 STAMBPL1Q96FJ0 436 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 NLRP3Q96P20 1036 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 MTRF1LQ9UGC7 380 aaKnown RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 FRMPD2Q68DX3 1309 aaPredicted RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 RGL2O15211 777 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 RPSAP08865 295 aaKnown RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 ZNF131P52739 623 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 UBE2SQ16763 222 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 ARSHQ5FYA8 562 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 EPM2AIP1Q7L775 607 aaPredicted RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 TBC1D1Q86TI0 1168 aaPredicted RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 GBP7Q8N8V2 638 aaPredicted RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 LNX1Q8TBB1 728 aaPredicted RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 NSMCE1Q8WV22 266 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 PRMT1Q99873 361 aaKnown RBP17.83■□□□□ 0.44
RANBP3-209ENST00000587411 PPP1R9AQ9ULJ8 1098 aa17.83■□□□□ 0.44
RANBP3-209ENST00000587411 KAT6BQ8WYB5 2073 aa17.82■□□□□ 0.44
RANBP3-209ENST00000587411 SLC29A2Q14542 456 aa17.82■□□□□ 0.44
RANBP3-209ENST00000587411 TCERG1LQ5VWI1 586 aa17.82■□□□□ 0.44
RANBP3-209ENST00000587411 RTFDC1Q9BY42 306 aaPredicted RBP17.82■□□□□ 0.44
RANBP3-209ENST00000587411 TYW1Q9NV66 732 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms