RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 NACC1Q96RE7 527 aa16.22■□□□□ 0.19
SMARCA4-212ENST00000586985 PPP1R16BQ96T49 567 aa16.22■□□□□ 0.19
SMARCA4-212ENST00000586985 POLR3CQ9BUI4 534 aaPredicted RBP16.22■□□□□ 0.19
SMARCA4-212ENST00000586985 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 RPS6KA5O75582 802 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 BMP15O95972 392 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 RPA1P27694 616 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 CD52P31358 61 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 CCT6AP40227 531 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 RFC5P40937 340 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 NFX1Q12986 1120 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 PAK2Q13177 524 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 KIZQ2M2Z5 673 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 ZNF697Q5TEC3 545 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 HAUS3Q68CZ6 603 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 HERC6Q8IVU3 1022 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 LINC01465Q8N7H1 131 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 ZNF579Q8NAF0 562 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 SPRYD3Q8NCJ5 442 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 SCLT1Q96NL6 688 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 PBX4Q9BYU1 374 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 ZSCAN16Q9H4T2 348 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 AGO3Q9H9G7 860 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 CDHR5Q9HBB8 845 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 SUCLA2Q9P2R7 463 aaPredicted RBP16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 PADI3Q9ULW8 664 aa16.21■□□□□ 0.19
SMARCA4-212ENST00000586985 A0A087WWV3 80 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 GPR182O15218 404 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 GPR32O75388 356 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 MED24O75448 989 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 SPATA31C1P0DKV0 1188 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 DNAJB2P25686 324 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 PBX2P40425 430 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 RABGGTBP53611 331 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 ATP2C1P98194 919 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 KRT79Q5XKE5 535 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.2■□□□□ 0.188e-7■■■□□ 15.1
SMARCA4-212ENST00000586985 FAM43BQ6ZT52 329 aaPredicted RBP16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 DEFB123Q8N688 67 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 PIGOQ8TEQ8 1089 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 TCP11Q8WWU5 503 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 TIFAQ96CG3 184 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 OSMRQ99650 979 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 FTHL17Q9BXU8 183 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 NOC2LQ9Y3T9 749 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 PCDHA11Q9Y5I1 949 aa16.2■□□□□ 0.18
SMARCA4-212ENST00000586985 ENPP3O14638 875 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 MUTP22033 750 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 GPC3P51654 580 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 DEFB103AP81534 67 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 ARL6IP4Q66PJ3 421 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 RHPN2Q8IUC4 686 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 MYOCDQ8IZQ8 938 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 IGSF22Q8N9C0 903 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 NLRP7Q8WX94 980 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 GCOM2Q9BZD3 368 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 ADAMTS10Q9H324 1103 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 DHX33Q9H6R0 707 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 SLC28A3Q9HAS3 691 aa16.19■□□□□ 0.18
SMARCA4-212ENST00000586985 TMEM265A0A087WTH1 108 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 VWA3AA6NCI4 1184 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 TLL1O43897 1013 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 GAS2O43903 313 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 DGAT1O75907 488 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 EIF4BP23588 611 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 RESTQ13127 1097 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 DRP2Q13474 957 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 SF3A1Q15459 793 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 IL17AQ16552 155 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 FAM117BQ6P1L5 589 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 SNX29Q8TEQ0 813 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 TMEM143Q96AN5 459 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 ZNF668Q96K58 619 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 MTRQ99707 1265 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 INO80BQ9C086 356 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 NKX2-4Q9H2Z4 354 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 SEMA6BQ9H3T3 888 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 BMP2KQ9NSY1 1161 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 DBR1Q9UK59 544 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 ST3GAL5Q9UNP4 418 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 CEP290O15078 2479 aa16.18■□□□□ 0.18
SMARCA4-212ENST00000586985 RBAK-RBAKDNI3L0D1 243 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 ASAP2O43150 1006 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 UPP2O95045 317 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 GJB5O95377 273 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 RARRES1P49788 294 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 BECN1Q14457 450 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 EMC2Q15006 297 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 Q7L0L9 218 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 TMCO2Q7Z6W1 182 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 TMEM40Q8WWA1 233 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 PRPF31Q8WWY3 499 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 PSPC1Q8WXF1 523 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 TOP1MTQ969P6 601 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 FAM161BQ96MY7 647 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 RAD9AQ99638 391 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 ZNF576Q9H609 170 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms