RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 PTPRFP10586 1907 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 HIP1RO75146 1068 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 SUPT3HO75486 399 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 LARGE1O95461 756 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 MSL3P1P0C860 447 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 S100A1P23297 94 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 CLCN2P51788 898 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 PMS2P54278 862 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 PPATQ06203 517 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 RESTQ13127 1097 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 PPIL2Q13356 520 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 ANKRD1Q15327 319 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 FAM173BQ6P4H8 233 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 CDAN1Q8IWY9 1227 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 ZNF296Q8WUU4 475 aaPredicted RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 ATP6V1G3Q96LB4 118 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 SEC62Q99442 399 aaKnown RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 FZD1Q9UP38 647 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 CARD8Q9Y2G2 431 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 CYP46A1Q9Y6A2 500 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 SNCAIPQ9Y6H5 919 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 SALL3Q9BXA9 1300 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 PHIPQ8WWQ0 1821 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 A0A1W2PQ27 194 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 A0A1W2PQ64 194 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 A0A1W2PQD8 194 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 IGF2BP3O00425 579 aaKnown RBP eCLIP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 WNT7AO00755 349 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 AKR1B10O60218 316 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 SURF6O75683 361 aaKnown RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 SERPINB8P50452 374 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 TUBP50607 506 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 ZNF131P52739 623 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 CACNB3P54284 484 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 MTTPP55157 894 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 PAK2Q13177 524 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 SPIDRQ14159 915 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 CNGA3Q16281 694 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 SYT2Q8N9I0 419 aaPredicted RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 GFM2Q969S9 779 aaKnown RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 NSUN4Q96CB9 384 aaKnown RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 GBP5Q96PP8 586 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 RPS6KC1Q96S38 1066 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 WRNIP1Q96S55 665 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 SYNCQ9H7C4 482 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 ELP3Q9H9T3 547 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 ZSWIM6Q9HCJ5 1215 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 LARSQ9P2J5 1176 aaKnown RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 STAP2Q9UGK3 403 aa10.79□□□□□ -0.68
ZNF540-203ENST00000586134 FBXO9Q9UK97 447 aaPredicted RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.79□□□□□ -0.68
ZNF540-203ENST00000586134 RBBP6Q7Z6E9 1792 aaKnown RBP10.78□□□□□ -0.68
ZNF540-203ENST00000586134 MAP3K13O43283 966 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 MGEA5O60502 916 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 MYCLP1P12525 358 aaPredicted RBP10.78□□□□□ -0.68
ZNF540-203ENST00000586134 MCAMP43121 646 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 ACADVLP49748 655 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 MECOMQ03112 1051 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 CEBPZQ03701 1054 aaKnown RBP10.78□□□□□ -0.68
ZNF540-203ENST00000586134 ITGB3BPQ13352 177 aaPredicted RBP10.78□□□□□ -0.68
ZNF540-203ENST00000586134 RNF220Q5VTB9 566 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 C3orf62Q6ZUJ4 267 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 FMR1NBQ8N0W7 255 aaPredicted RBP10.78□□□□□ -0.68
ZNF540-203ENST00000586134 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 MMGT1Q8N4V1 131 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 MREGQ8N565 214 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 CCDC197Q8NCU1 140 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 ZNF280CQ8ND82 737 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 TRPC4APQ8TEL6 797 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 ATP8B4Q8TF62 1192 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 CCDC51Q96ER9 411 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 IFT74Q96LB3 600 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 DESI2Q9BSY9 194 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 HSD3B7Q9H2F3 369 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 HOXC10Q9NYD6 342 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 DLGAP2Q9P1A6 1054 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 ATAD5Q96QE3 1844 aa10.78□□□□□ -0.68
ZNF540-203ENST00000586134 BTBD19C9JJ37 291 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 AKR1B15C9JRZ8 316 aaPredicted RBP10.77□□□□□ -0.68
ZNF540-203ENST00000586134 RAD21O60216 631 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 ZBED4O75132 1171 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 MTRF1O75570 445 aaKnown RBP10.77□□□□□ -0.68
ZNF540-203ENST00000586134 ALDH2P05091 517 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 CETPP11597 493 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 GNAZP19086 355 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 ST3GAL1Q11201 340 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 NFIAQ12857 509 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 MKRN3Q13064 507 aaKnown RBP10.77□□□□□ -0.68
ZNF540-203ENST00000586134 ITGA7Q13683 1181 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 GRAMD4Q6IC98 578 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 IQCKQ8N0W5 287 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 PDILTQ8N807 584 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 MRPS27Q92552 414 aaKnown RBP10.77□□□□□ -0.68
ZNF540-203ENST00000586134 LENG1Q96BZ8 264 aaPredicted RBP10.77□□□□□ -0.68
ZNF540-203ENST00000586134 DUSP9Q99956 384 aaKnown RBP10.77□□□□□ -0.68
ZNF540-203ENST00000586134 SLF1Q9BQI6 1058 aa10.77□□□□□ -0.68
ZNF540-203ENST00000586134 ALDH8A1Q9H2A2 487 aaPredicted RBP10.77□□□□□ -0.68
ZNF540-203ENST00000586134 KCNH4Q9UQ05 1017 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms