RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 NUBP1P53384 320 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 PLCB3Q01970 1234 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 ITGB3BPQ13352 177 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 TSGA10IPQ3SY00 556 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 ABHD15Q6UXT9 468 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 TMEM184AQ6ZMB5 413 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 PLA2G4DQ86XP0 818 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 BBXQ8WY36 941 aaPredicted RBP12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 SUSD6Q92537 303 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 MRPS27Q92552 414 aaKnown RBP12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 TMEM117Q9H0C3 514 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 ENTPD7Q9NQZ7 604 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 TBC1D22BQ9NU19 505 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 NR2E1Q9Y466 385 aa12.17□□□□□ -0.46
CSNK1D-226ENST00000585026 CARNS1A5YM72 827 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 DDX39AO00148 427 aaKnown RBP12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 TMOD1P28289 359 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 TECP42680 631 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 ERVFC1P60507 584 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 FAM189BP81408 668 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 COL9A3Q14050 684 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 RABEP1Q15276 862 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 RTN1Q16799 776 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 PTPN21Q16825 1174 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 TPRNQ4KMQ1 711 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 FAM102BQ5T8I3 360 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 CREB3L3Q68CJ9 461 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 CES5AQ6NT32 575 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 SWSAP1Q6NVH7 229 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 ANKRD54Q6NXT1 300 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 METTL13Q8N6R0 699 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 PRSS33Q8NF86 280 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 RASGRP4Q8TDF6 673 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 SNX21Q969T3 373 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 FAM167AQ96KS9 214 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 MAP7D2Q96T17 732 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 TCF25Q9BQ70 676 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 V9GY48 417 aaPredicted RBP12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 TECTAO75443 2155 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 ZNF318Q5VUA4 2279 aa12.16□□□□□ -0.46
CSNK1D-226ENST00000585026 DOCK5Q9H7D0 1870 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 IPO5O00410 1097 aaKnown RBP12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 FSCN2O14926 492 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 ZBTB43O43298 467 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 MGEA5O60502 916 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 CCNE2O96020 404 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 PSAPP07602 524 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 SETQ01105 290 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 KIZQ2M2Z5 673 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 IER5LQ5T953 404 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 PLPP4Q5VZY2 271 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 ZNF746Q6NUN9 644 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 APOA5Q6Q788 366 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 TMC7Q7Z402 723 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 CCDC60Q8IWA6 550 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 SMAP1Q8IYB5 467 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 LRRC43Q8N309 656 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 TMEM87AQ8NBN3 555 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 CCDC12Q8WUD4 166 aaPredicted RBP12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 TMEM40Q8WWA1 233 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 CASP10Q92851 521 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 PGBD1Q96JS3 809 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 ZNF558Q96NG5 402 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 NECTIN4Q96NY8 510 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 OSMRQ99650 979 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 ZNF577Q9BSK1 485 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 CDHR5Q9HBB8 845 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 PCDHGC5Q9Y5F6 944 aa12.15□□□□□ -0.46
CSNK1D-226ENST00000585026 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 CCDC196A0A1B0GTZ2 297 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 FGFR1P11362 822 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 AVPR2P30518 371 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 RCAN1P53805 252 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 ITIH3Q06033 890 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 KCNT2Q6UVM3 1135 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 FAM228AQ86W67 206 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 RSPH1Q8WYR4 309 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 TM6SF1Q9BZW5 370 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 S1PR5Q9H228 398 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 CWH43Q9H720 699 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 SPG21Q9NZD8 308 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 AKT3Q9Y243 479 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 PCDHA10Q9Y5I2 948 aa12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 MAFBQ9Y5Q3 323 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-226ENST00000585026 GOLGA8AA7E2F4 631 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 GOLGA8BA8MQT2 603 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 GPR32O75388 356 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 C22orf31O95567 290 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 VTNP04004 478 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 CYP3A4P08684 503 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 CLK2P49760 499 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 CDC42EP1Q00587 391 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 TCF15Q12870 199 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 BECN1Q14457 450 aa12.13□□□□□ -0.47
CSNK1D-226ENST00000585026 DSC3Q14574 896 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms