RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PSMC6P62333 389 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ZBED6P86452 979 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 AMPD2Q01433 879 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 WDR93Q6P2C0 686 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 GPR142Q7Z601 462 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TPH2Q8IWU9 490 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ACRBPQ8NEB7 543 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ERGIC2Q96RQ1 377 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TUBGCP2Q9BSJ2 902 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TRIM9Q9C026 710 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ANKZF1Q9H8Y5 726 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TUFT1Q9NNX1 390 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 CALCOCO1Q9P1Z2 691 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 PVALEFA0A1B0GWK0 134 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 COBLO75128 1261 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TM4SF4P48230 202 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 EEPD1Q7L9B9 569 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ABRAQ8N0Z2 381 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 CSGALNACT2Q8N6G5 542 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TTYH3Q9C0H2 523 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 BCAS3Q9H6U6 928 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 DNM3Q9UQ16 869 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SAMM50Q9Y512 469 aa16.5■□□□□ 0.23
CDK5RAP3-236ENST00000584991 MYMKA6NI61 221 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 EIF3CLB5ME19 914 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 RNF225M0QZC1 329 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TLR2O60603 784 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SASH3O75995 380 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ECM2O94769 699 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SEC31AO94979 1220 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 IPO7O95373 1038 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SSBP05455 408 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 PLA2G4BP0C869 781 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 MAPK4P31152 587 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ICAM3P32942 547 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ZNF792Q3KQV3 632 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 BEND6Q5SZJ8 279 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 PAPD7Q5XG87 772 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TXLNBQ8N3L3 684 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 EIF3CQ99613 913 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ZFYVE28Q9HCC9 887 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TCEAL9Q9UHQ7 104 aa16.49■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 CCNE2O96020 404 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 HNRNPH3P31942 346 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ASIC1P78348 528 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 KRT76Q01546 638 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SP2Q02086 613 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 C17orf99Q6UX52 265 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 DYMQ7RTS9 669 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 BANK1Q8NDB2 785 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 DUSP9Q99956 384 aaKnown RBP16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TSGA10Q9BZW7 698 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ACBD3Q9H3P7 528 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 L1RE1Q9UN81 338 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 NFASCO94856 1347 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 WDR81Q562E7 1941 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SORBS3O60504 671 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 PSMD2Q13200 908 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 DEFB115Q30KQ5 88 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 WDR59Q6PJI9 974 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TRAPPC11Q7Z392 1133 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 NEK9Q8TD19 979 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 EXOC4Q96A65 974 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 CHP1Q99653 195 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 LXNQ9BS40 222 aa16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 WRAP73Q9P2S5 460 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TRIM49BA6NDI0 452 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ASB14A6NK59 587 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 P4HBP07237 508 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 OAS2P29728 719 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 JAK3P52333 1124 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 PMS1P54277 932 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 SLC12A3P55017 1021 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 CKAP4Q07065 602 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 CRHR2Q13324 411 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 GRB14Q14449 540 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 FKBP15Q5T1M5 1219 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 CENPPQ6IPU0 288 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ZNF746Q6NUN9 644 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 DPP9Q86TI2 863 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 PIGOQ8TEQ8 1089 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 DDX12PQ92771 950 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 EDEM3Q9BZQ6 932 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 JPH1Q9HDC5 661 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 PUF60Q9UHX1 559 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 MAPK8IP1Q9UQF2 711 aa16.47■□□□□ 0.23
CDK5RAP3-236ENST00000584991 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TARSL2A2RTX5 802 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 WDR64B1ANS9 1081 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 ZBTB39O15060 712 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 AOC2O75106 756 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 EYA4O95677 639 aa16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 TRIM21P19474 475 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-236ENST00000584991 MUTP22033 750 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms