RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 TDRD3Q9H7E2 651 aaKnown RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 FAM207AQ9NSI2 230 aaPredicted RBP13.85□□□□□ -0.19
ITGB4-212ENST00000584558 NFS1Q9Y697 457 aa13.85□□□□□ -0.19
ITGB4-212ENST00000584558 FAM196BA6NMK8 535 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 AHCYL1O43865 530 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 EVI5O60447 810 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 SMIM24O75264 130 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 CLSTN1O94985 981 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 FESP07332 822 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 VIL1P09327 827 aaKnown RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 GNAT1P11488 350 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 CTCFP49711 727 aaPredicted RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 PAPOLAP51003 745 aaKnown RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 NAPAP54920 295 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 RSBN1LQ6PCB5 846 aaPredicted RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 ERICH1Q86X53 443 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 SIAH1Q8IUQ4 282 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 LRRC45Q96CN5 670 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 NOC4LQ9BVI4 516 aaKnown RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 FBXL5Q9UKA1 691 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 CCDC194A0A1B0GVG4 234 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 SMCO2A6NFE2 343 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 A8MUI8 341 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 PSMA7O14818 248 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 PAEPP09466 180 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 ABL2P42684 1182 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 ERVK-9P63128 1117 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 GFPT1Q06210 699 aaPredicted RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 PDCD2Q16342 344 aaPredicted RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 KCNV2Q8TDN2 545 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 XPO6Q96QU8 1125 aaKnown RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 JMJD4Q9H9V9 463 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 PAPOLBQ9NRJ5 636 aaKnown RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 ZFATQ9P243 1243 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 SEC63Q9UGP8 760 aaKnown RBP13.84□□□□□ -0.19
ITGB4-212ENST00000584558 AGAP1Q9UPQ3 857 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 STK38LQ9Y2H1 464 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 PCDHGC5Q9Y5F6 944 aa13.84□□□□□ -0.19
ITGB4-212ENST00000584558 ATP4AP20648 1035 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 ALDH5A1P51649 535 aaPredicted RBP13.83□□□□□ -0.2
ITGB4-212ENST00000584558 INF2Q27J81 1249 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 CNOT6LQ96LI5 555 aaKnown RBP13.83□□□□□ -0.2
ITGB4-212ENST00000584558 VAT1LQ9HCJ6 419 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 ZNF277Q9NRM2 450 aaPredicted RBP13.83□□□□□ -0.2
ITGB4-212ENST00000584558 NYAP2Q9P242 653 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 CFAP73A6NFT4 308 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 GSTA1P08263 222 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 SLC1A4P43007 532 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 TNNC1P63316 161 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 ANKRD20A2Q5SQ80 823 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 ANKRD20A1Q5TYW2 823 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 ANKRD20A3Q5VUR7 823 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 KRT25Q7Z3Z0 450 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 CCDC155Q8N6L0 562 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 ELAC2Q9BQ52 826 aaKnown RBP13.83□□□□□ -0.2
ITGB4-212ENST00000584558 SELENOSQ9BQE4 189 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 VPS33BQ9H267 617 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 TMEM60Q9H2L4 133 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 C6orf50Q9HD87 102 aa13.83□□□□□ -0.2
ITGB4-212ENST00000584558 PPP1R11O60927 126 aaPredicted RBP13.82□□□□□ -0.2
ITGB4-212ENST00000584558 PALMO75781 387 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 CDK17Q00537 523 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 TAF11Q15544 211 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 TTBK2Q6IQ55 1244 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 ADGRF4Q8IZF3 695 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 PLCD4Q9BRC7 762 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 PLAGL2Q9UPG8 496 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 FER1L6Q2WGJ9 1857 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 MYH7BA7E2Y1 1941 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 EPHB6O15197 1021 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 NKRFO15226 690 aaKnown RBP eCLIP13.82□□□□□ -0.2
ITGB4-212ENST00000584558 PYGLP06737 847 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 NQO1P15559 274 aaKnown RBP13.82□□□□□ -0.2
ITGB4-212ENST00000584558 CCND1P24385 295 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 GNA11P29992 359 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 LONP1P36776 959 aaKnown RBP13.82□□□□□ -0.2
ITGB4-212ENST00000584558 FLT3P36888 993 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 STAT6P42226 847 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 JAG1P78504 1218 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 EHHADHQ08426 723 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 ZNF268Q14587 947 aaPredicted RBP13.82□□□□□ -0.2
ITGB4-212ENST00000584558 SLC5A9Q2M3M2 681 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 CERKLQ49MI3 558 aaPredicted RBP13.82□□□□□ -0.2
ITGB4-212ENST00000584558 AGBL2Q5U5Z8 902 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 CWF19L1Q69YN2 538 aaKnown RBP13.82□□□□□ -0.2
ITGB4-212ENST00000584558 TRPM8Q7Z2W7 1104 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 RPUSD2Q8IZ73 545 aaKnown RBP13.82□□□□□ -0.2
ITGB4-212ENST00000584558 KIF2BQ8N4N8 673 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 ISCUQ9H1K1 167 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 NEUROG2Q9H2A3 272 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 ARHGEF10LQ9HCE6 1279 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 LRRC4CQ9HCJ2 640 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 ABCF3Q9NUQ8 709 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 SAMD15Q9P1V8 674 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 TSKSQ9UJT2 592 aa13.82□□□□□ -0.2
ITGB4-212ENST00000584558 SPDYE2BA6NHP3 402 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 EDIL3O43854 480 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 RTN3O95197 1032 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms