RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZNF462Q96JM2 2506 aa12.74□□□□□ -0.37
CCDC47-206ENST00000584112 CNTNAP5Q8WYK1 1306 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 TEP1Q99973 2627 aaKnown RBP12.73□□□□□ -0.37
CCDC47-206ENST00000584112 POTEMA6NI47 508 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 hCG_1984214I3L0E3 225 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 LGALS2P05162 132 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 ITGB1P05556 798 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 DCNP07585 359 aaKnown RBP12.73□□□□□ -0.37
CCDC47-206ENST00000584112 RCAN1P53805 252 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 EXOSC10Q01780 885 aaKnown RBP12.73□□□□□ -0.37
CCDC47-206ENST00000584112 SEMA3FQ13275 785 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 RTN1Q16799 776 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 TRIM71Q2Q1W2 868 aaKnown RBP12.73□□□□□ -0.37
CCDC47-206ENST00000584112 PPP1R18Q6NYC8 613 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 SYCE2Q6PIF2 218 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 POTEGQ6S5H5 508 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 HEATR3Q7Z4Q2 680 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 ZNF713Q8N859 430 aaPredicted RBP12.73□□□□□ -0.37
CCDC47-206ENST00000584112 SPPL3Q8TCT6 385 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 GPRASP2Q96D09 838 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 POMKQ9H5K3 350 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 FBXL21Q9UKT6 434 aa12.73□□□□□ -0.37
CCDC47-206ENST00000584112 ZNF215Q9UL58 517 aaPredicted RBP12.73□□□□□ -0.37
CCDC47-206ENST00000584112 SMG5Q9UPR3 1016 aaKnown RBP12.73□□□□□ -0.37
CCDC47-206ENST00000584112 PLXNA4Q9HCM2 1894 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 EMSYQ7Z589 1322 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 hCG_1642624A0A1W2PR95 340 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 C17orf102A2RUQ5 167 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 GNAT1P11488 350 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 FGD1P98174 961 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 ADCK5Q3MIX3 580 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 NETO1Q8TDF5 533 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 TCEANC2Q96MN5 208 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 GPR20Q99678 358 aa12.72□□□□□ -0.37
CCDC47-206ENST00000584112 HNRNPABQ99729 332 aaKnown RBP12.72□□□□□ -0.37
CCDC47-206ENST00000584112 ADAMTS20P59510 1910 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 KLF18A0A0U1RQI7 1052 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 CCDC196A0A1B0GTZ2 297 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 GOLGA8AA7E2F4 631 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 GOLGA8BA8MQT2 603 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 MAFGO15525 162 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 REC8O95072 547 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 SMIM10L2AP0DMW4 78 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 SMIM10L2BP0DMW5 78 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 TECP42680 631 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 RBM25P49756 843 aaKnown RBP12.71□□□□□ -0.37
CCDC47-206ENST00000584112 NAPAP54920 295 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 UBE2SQ16763 222 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 SERINC5Q86VE9 423 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 C1orf210Q8IVY1 113 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 MAML2Q8IZL2 1156 aaPredicted RBP12.71□□□□□ -0.37
CCDC47-206ENST00000584112 ADAM32Q8TC27 787 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 POF1BQ8WVV4 589 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 CLP1Q92989 425 aaKnown RBP12.71□□□□□ -0.37
CCDC47-206ENST00000584112 ATP6V0A1Q93050 837 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 GLT8D2Q9H1C3 349 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 BRPF3Q9ULD4 1205 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 PCDHA6Q9UN73 950 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 PCDHA8Q9Y5H6 950 aa12.71□□□□□ -0.37
CCDC47-206ENST00000584112 ADGRA3Q8IWK6 1321 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 CAND2O75155 1236 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 FOSP01100 380 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-206ENST00000584112 HOXC8P31273 242 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 SP4Q02446 784 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 SPEM2Q0P670 501 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 MTMR1Q13613 665 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 PLEKHG4Q58EX7 1191 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 WWC2Q6AWC2 1192 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 ANKRD54Q6NXT1 300 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 KCNB2Q92953 911 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 SECISBP2LQ93073 1101 aaKnown RBP12.7□□□□□ -0.38
CCDC47-206ENST00000584112 RNPEPQ9H4A4 650 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 BCAS3Q9H6U6 928 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 RIC8AQ9NPQ8 531 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 NAP1L2Q9ULW6 460 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-206ENST00000584112 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 UBIAD1Q9Y5Z9 338 aa12.7□□□□□ -0.38
CCDC47-206ENST00000584112 KRBA1A5PL33 1030 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 RSPH10B2B2RC85 870 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 GDF9O60383 454 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 NEFLP07196 543 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 WEE2P0C1S8 567 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 RSPH10BP0C881 870 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 KCNA2P16389 499 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 ITGB5P18084 799 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 HSPA4P34932 840 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 TCF7P36402 384 aaPredicted RBP12.69□□□□□ -0.38
CCDC47-206ENST00000584112 THPOP40225 353 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 METAP2P50579 478 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCDC47-206ENST00000584112 ADCY7P51828 1080 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 TBC1D8BQ0IIM8 1120 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 FUT2Q10981 343 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 UTP14CQ5TAP6 766 aaKnown RBP12.69□□□□□ -0.38
CCDC47-206ENST00000584112 LLGL2Q6P1M3 1020 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 BLOC1S2Q6QNY1 142 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 KLHL23Q8NBE8 558 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 JAKMIP1Q96N16 626 aaKnown RBP12.69□□□□□ -0.38
CCDC47-206ENST00000584112 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 JADE2Q9NQC1 790 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms