RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	NRIP1	P48552	1158 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CRYBB1	P53674	252 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ADAM15	Q13444	863 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	UGCG	Q16739	394 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	EFCAB12	Q6NXP0	572 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	BICD2	Q8TD16	824 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	MICAL1	Q8TDZ2	1067 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CCDC136	Q96JN2	1154 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	RGS18	Q9NS28	235 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CD207	Q9UJ71	328 aa		13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	WDR64	B1ANS9	1081 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114		C9IYK1	514 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PER2	O15055	1255 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	MSH4	O15457	936 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	DCX	O43602	365 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ZNF862	O60290	1169 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	ALAD	P13716	330 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	IFNAR1	P17181	557 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	FGFR4	P22455	802 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PSMA5	P28066	241 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CIITA	P33076	1130 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	NLRP11	P59045	1033 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	NLRP5	P59047	1200 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	RBM10	P98175	930 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PRKCE	Q02156	737 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SMAD4	Q13485	552 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SMAD2	Q15796	467 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CSPP1	Q1MSJ5	1256 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	NAALADL2	Q58DX5	795 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	MCTP2	Q6DN12	878 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	SLC24A5	Q71RS6	500 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	THNSL1	Q8IYQ7	743 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	CCDC148	Q8NFR7	591 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PPP2R3C	Q969Q6	453 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	RNF26	Q9BY78	433 aa	Predicted RBP	13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	DISC1	Q9NRI5	854 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	C1orf112	Q9NSG2	853 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	TYW1	Q9NV66	732 aa	Known RBP	13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PRKAG3	Q9UGI9	489 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	PCDHB12	Q9Y5F1	795 aa		13.15	□□□□□ -0.3
CDK5RAP3-223	ENST00000582114	C19orf67	A6NJJ6	358 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	PRR33	A8MZF0	331 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	GAS7	O60861	476 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	REC8	O95072	547 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	GLP2R	O95838	553 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	OAT	P04181	439 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	PBX3	P40426	434 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	STK3	Q13188	491 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TOB2	Q14106	344 aa	Predicted RBP	13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ODR4	Q5SWX8	454 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	LRCH2	Q5VUJ6	765 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	COLGALT1	Q8NBJ5	622 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	RNF169	Q8NCN4	708 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TBCK	Q8TEA7	893 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	FAM167A	Q96KS9	214 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	SCLT1	Q96NL6	688 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	AIFM3	Q96NN9	605 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	MAP7D2	Q96T17	732 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	AGXT2	Q9BYV1	514 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	UNC45A	Q9H3U1	944 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ATP6V0A4	Q9HBG4	840 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	CLEC1B	Q9P126	229 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	MUTYH	Q9UIF7	546 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	CEP131	Q9UPN4	1083 aa		13.14	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	WDR81	Q562E7	1941 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TMEM150B	A6NC51	233 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	MAGEB2	O15479	319 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	DTNB	O60941	627 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	CSDE1	O75534	798 aa	Known RBP	13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	FGF18	O76093	207 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TDP2	O95551	362 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TMOD1	P28289	359 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ERVFC1	P60507	584 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	SSRP1	Q08945	709 aa	Known RBP	13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	DSC3	Q14574	896 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	PLPP4	Q5VZY2	271 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	RUFY3	Q7L099	469 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	FBXL16	Q8N461	479 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	EFHB	Q8N7U6	833 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	MSLNL	Q96KJ4	702 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	SH2D3A	Q9BRG2	576 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TEKT3	Q9BXF9	490 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	UPF3B	Q9BZI7	483 aa	Known RBP	13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ADAMTS10	Q9H324	1103 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	CWH43	Q9H720	699 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TLE6	Q9H808	572 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TLR9	Q9NR96	1032 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	AAAS	Q9NRG9	546 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TMEM161A	Q9NX61	479 aa		13.13	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	CPLX1	O14810	134 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TBC1D8B	Q0IIM8	1120 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	DRP2	Q13474	957 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	MTERF2	Q49AM1	385 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	LRRC55	Q6ZSA7	311 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	MIER3	Q7Z3K6	550 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TRIM22	Q8IYM9	498 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	LINC01465	Q8N7H1	131 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms