RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 NPHP3-ACAD11A0A0J9YXS1 232 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 KLRC4O43908 158 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 KRT18P05783 430 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 GNAT1P11488 350 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 KLRC1P26715 233 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 CASP1P29466 404 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 HOXC8P31273 242 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 POLGP54098 1239 aaPredicted RBP10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 CHMP4BP1P59074 171 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ADAM17P78536 824 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 PPFIA1Q13136 1202 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ITGA7Q13683 1181 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 GRIK4Q16099 956 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 MARCH8Q5T0T0 291 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 NT5DC1Q5TFE4 455 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 NFRKBQ6P4R8 1299 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 MTHFD1LQ6UB35 978 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 RBM43Q6ZSC3 357 aaKnown RBP10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 UNC13DQ70J99 1090 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 C7orf31Q8N865 590 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ANKLE1Q8NAG6 615 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 MCPH1Q8NEM0 835 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 SLC7A3Q8WY07 619 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 VTI1AQ96AJ9 217 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 GLT1D1Q96MS3 346 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 GSDMAQ96QA5 445 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ATP6V0A4Q9HBG4 840 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 SETD4Q9NVD3 440 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 HDAC6Q9UBN7 1215 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 TUBE1Q9UJT0 475 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ODF2LQ9ULJ1 636 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 PCDHA5Q9Y5H7 936 aa10.17□□□□□ -0.78
CDK5RAP3-220ENST00000581160 A0A1W2PQ45 241 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 A0A1W2PQY0 241 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 FRMD3A2A2Y4 597 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 C17orf102A2RUQ5 167 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 MBLAC1A4D2B0 266 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 GAS2O43903 313 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 USO1O60763 962 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 C22orf31O95567 290 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 RPN1P04843 607 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ARL2P36404 184 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 MNX1P50219 401 aaPredicted RBP10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 IGBP1P78318 339 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 TBC1D8BQ0IIM8 1120 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 PSMD2Q13200 908 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 KCNB1Q14721 858 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 EMC2Q15006 297 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 IER5Q5VY09 327 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 EFCAB12Q6NXP0 572 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 CCDC65Q8IXS2 484 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 SLC43A3Q8NBI5 491 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 RETREG2Q8NC44 543 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 TRAPPC12Q8WVT3 735 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 TCP11Q8WWU5 503 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 KIFAP3Q92845 792 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 SMARCE1Q969G3 411 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 CCDC47Q96A33 483 aaKnown RBP10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 REEP2Q9BRK0 252 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 C17orf75Q9HAS0 396 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 XPNPEP1Q9NQW7 623 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 PANK4Q9NVE7 773 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 KCNG1Q9UIX4 513 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 PCDHA2Q9Y5H9 948 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 COL4A3BPQ9Y5P4 624 aa10.16□□□□□ -0.78
CDK5RAP3-220ENST00000581160 SCN10AQ9Y5Y9 1956 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 FRMPD3Q5JV73 1810 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 A0A0U1RQG5 324 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 SMIM35A0A1B0GVV1 85 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ASAP2O43150 1006 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 HIP1RO75146 1068 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 FAM13AO94988 1023 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 IDEP14735 1019 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 GAP43P17677 238 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 TMOD1P28289 359 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 DNM2P50570 870 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 CDK7P50613 346 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ZNF131P52739 623 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 RTP1P59025 263 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ASIC1P78348 528 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 CACNB1Q02641 598 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 RAD51AP2Q09MP3 1159 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 MAPK7Q13164 816 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 MKRN4PQ13434 485 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 HIC1Q14526 733 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 KMT5BQ4FZB7 885 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 FAM102BQ5T8I3 360 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 MAEAQ7L5Y9 396 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 DAW1Q8N136 415 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 LINC01465Q8N7H1 131 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 LMBR1Q8WVP7 490 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 ERCC4Q92889 916 aaPredicted RBP10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 DRC1Q96MC2 740 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 GTPBP4Q9BZE4 634 aaKnown RBP10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 SUGCTQ9HAC7 445 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 POLD4Q9HCU8 107 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 STARD7Q9NQZ5 370 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 RMND1Q9NWS8 449 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 GTF2IRD1Q9UHL9 959 aa10.15□□□□□ -0.78
CDK5RAP3-220ENST00000581160 KAT6AQ92794 2004 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms