RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PARPBPQ9NWS1 579 aa5.08□□□□□ -1.6
SMG8-205ENST00000580798 TCRBV5S4A2TA0A5A2 114 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 KRTAP23-1A1A580 65 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 ZRANB2O95218 330 aaKnown RBP eCLIP5.07□□□□□ -1.6
SMG8-205ENST00000580798 PDE6AP16499 860 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 ADRA1BP35368 520 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 HHEXQ03014 270 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 DBPQ10586 325 aaPredicted RBP5.07□□□□□ -1.6
SMG8-205ENST00000580798 RAB33AQ14088 237 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 MYBPC2Q14324 1141 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 DPP8Q6V1X1 898 aaPredicted RBP5.07□□□□□ -1.6
SMG8-205ENST00000580798 GPR135Q8IZ08 494 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 RPUSD2Q8IZ73 545 aaKnown RBP5.07□□□□□ -1.6
SMG8-205ENST00000580798 ALG1Q9BT22 464 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 TRAF6Q9Y4K3 522 aa5.07□□□□□ -1.6
SMG8-205ENST00000580798 CCDC194A0A1B0GVG4 234 aa5.06□□□□□ -1.6
SMG8-205ENST00000580798 PEX11BO96011 259 aa5.06□□□□□ -1.6
SMG8-205ENST00000580798 HMGCRP04035 888 aa5.06□□□□□ -1.6
SMG8-205ENST00000580798 FSTL1Q12841 308 aa5.06□□□□□ -1.6
SMG8-205ENST00000580798 GRM7Q14831 915 aa5.06□□□□□ -1.6
SMG8-205ENST00000580798 WDR72Q3MJ13 1102 aa5.06□□□□□ -1.6
SMG8-205ENST00000580798 USP30Q70CQ3 517 aa5.06□□□□□ -1.6
SMG8-205ENST00000580798 DPH6Q7L8W6 267 aa5.06□□□□□ -1.6
SMG8-205ENST00000580798 ANP32BQ92688 251 aaKnown RBP5.06□□□□□ -1.6
SMG8-205ENST00000580798 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.06□□□□□ -1.6
SMG8-205ENST00000580798 COMMD10Q9Y6G5 202 aa5.06□□□□□ -1.6
SMG8-205ENST00000580798 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.05□□□□□ -1.6
SMG8-205ENST00000580798 TMEM191CA6NGB0 347 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 CAPN14A8MX76 684 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 PPFIA4O75335 1185 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 MAP4K4O95819 1239 aaPredicted RBP5.05□□□□□ -1.6
SMG8-205ENST00000580798 KCNQ1P51787 676 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 FOXD4Q12950 439 aaPredicted RBP5.05□□□□□ -1.6
SMG8-205ENST00000580798 RRP1BQ14684 758 aaKnown RBP5.05□□□□□ -1.6
SMG8-205ENST00000580798 LAIR1Q6GTX8 287 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 ZNF662Q6ZS27 426 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 SPATC1Q76KD6 591 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 ADGRE4PQ86SQ3 457 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 THEMISQ8N1K5 641 aaPredicted RBP5.05□□□□□ -1.6
SMG8-205ENST00000580798 D2HGDHQ8N465 521 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 ZCRB1Q8TBF4 217 aaKnown RBP5.05□□□□□ -1.6
SMG8-205ENST00000580798 PNISRQ8TF01 805 aaKnown RBP5.05□□□□□ -1.6
SMG8-205ENST00000580798 SPATA9Q9BWV2 254 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 NELFAQ9H3P2 528 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 KLHL42Q9P2K6 505 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 SRPK3Q9UPE1 567 aa5.05□□□□□ -1.6
SMG8-205ENST00000580798 TTC36A6NLP5 189 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 FAM90A27PA6NNH2 459 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 ADCY3O60266 1144 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 PTPN1P18031 435 aaKnown RBP5.04□□□□□ -1.6
SMG8-205ENST00000580798 ADCY8P40145 1251 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 SLC25A3Q00325 362 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 PAK1Q13153 545 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 PTPROQ16827 1216 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 BTBD8Q5XKL5 378 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 TRIM44Q96DX7 344 aaPredicted RBP5.04□□□□□ -1.6
SMG8-205ENST00000580798 TMEM176AQ96HP8 235 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 TRIM55Q9BYV6 548 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 GPRC5BQ9NZH0 403 aa5.04□□□□□ -1.6
SMG8-205ENST00000580798 EXOC5O00471 708 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 MAN2B1O00754 1011 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 CYP27B1O15528 508 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 WDHD1O75717 1129 aaPredicted RBP5.03□□□□□ -1.6
SMG8-205ENST00000580798 PROZP22891 400 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 IL13RA1P78552 427 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 CRHR2Q13324 411 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 PCOLCEQ15113 449 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 GPR19Q15760 415 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 ARHGAP36Q6ZRI8 547 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 MTDHQ86UE4 582 aaKnown RBP5.03□□□□□ -1.6
SMG8-205ENST00000580798 PTRH1Q86Y79 214 aaKnown RBP5.03□□□□□ -1.6
SMG8-205ENST00000580798 GPR150Q8NGU9 434 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 ZNF669Q96BR6 464 aaPredicted RBP5.03□□□□□ -1.6
SMG8-205ENST00000580798 PCGF6Q9BYE7 350 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 AGO3Q9H9G7 860 aaKnown RBP5.03□□□□□ -1.6
SMG8-205ENST00000580798 RIC8BQ9NVN3 520 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 PNMA2Q9UL42 364 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 MSRB2Q9Y3D2 182 aa5.03□□□□□ -1.6
SMG8-205ENST00000580798 AQP7O14520 342 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 AMY2AP04746 511 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 C6orf222P0C671 652 aaPredicted RBP5.02□□□□□ -1.61
SMG8-205ENST00000580798 KRT15P19012 456 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 AMY2BP19961 511 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 PAX3P23760 479 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 MRE11P49959 708 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 MRPS21P82921 87 aaKnown RBP5.02□□□□□ -1.61
SMG8-205ENST00000580798 EIF4HQ15056 248 aaKnown RBP5.02□□□□□ -1.61
SMG8-205ENST00000580798 FIGNQ5HY92 759 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 FOXB2Q5VYV0 432 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 TRIM68Q6AZZ1 485 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 MAMDC2Q7Z304 686 aaPredicted RBP5.02□□□□□ -1.61
SMG8-205ENST00000580798 NLGN4XQ8N0W4 816 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 SDR16C5Q8N3Y7 309 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 PCDH19Q8TAB3 1148 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 FBXW5Q969U6 566 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 OR10A2Q9H208 303 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 CATSPERZQ9NTU4 200 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 ARHGAP28Q9P2N2 729 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 PFDN2Q9UHV9 154 aa5.02□□□□□ -1.61
SMG8-205ENST00000580798 KCNG1Q9UIX4 513 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms