RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ZSCAN12O43309 604 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 STX10O60499 249 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TFRCP02786 760 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TPM1P09493 284 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TXNP10599 105 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ATP4AP20648 1035 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 YY1P25490 414 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 COPB1P53618 953 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 GRB14Q14449 540 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 FAM26FQ5R3K3 315 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TAF3Q5VWG9 929 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PADI6Q6TGC4 694 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SRRTQ9BXP5 876 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ARHGAP39Q9C0H5 1083 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MLXIPQ9HAP2 919 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 STK24Q9Y6E0 443 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KIAA1217Q5T5P2 1943 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 GSTTP1A0A1W2PQM5 241 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 STRNO43815 780 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SNAI1O95863 264 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SFNP31947 248 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ADCYAP1R1P41586 468 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 UBXN1Q04323 297 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CCL14Q16627 93 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 XKR9Q5GH70 373 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CCDC65Q8IXS2 484 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MAML3Q96JK9 1138 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 LRRC27Q9C0I9 530 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ZNF446Q9NWS9 450 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MCM3APO60318 1980 aa13.99□□□□□ -0.17
CDK5RAP3-217ENST00000580287 NFASCO94856 1347 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CLSTN1O94985 981 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MYBP10242 640 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CYP2B6P20813 491 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MARK3P27448 753 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 NMT1P30419 496 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 DAW1Q8N136 415 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ZNF397Q8NF99 534 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ERO1AQ96HE7 468 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PCYT2Q99447 389 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SENP7Q9BQF6 1050 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MAF1Q9H063 256 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MRPL44Q9H9J2 332 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 LZTFL1Q9NQ48 299 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 FLRT1Q9NZU1 646 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MAGEC2Q9UBF1 373 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 RNF225M0QZC1 329 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 STBD1O95210 358 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ABL1P00519 1130 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PSAPP07602 524 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MAPK4P31152 587 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 GNG11P61952 73 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CAP1Q01518 475 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ZC2HC1CQ53FD0 456 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TAPT1Q6NXT6 567 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CCDC62Q6P9F0 684 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 C4orf19Q8IY42 314 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MYCT1Q8N699 235 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 DUSP9Q99956 384 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CARD6Q9BX69 1037 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 L2HGDHQ9H9P8 463 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 LIMA1Q9UHB6 759 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.98□□□□□ -0.171e-7■■□□□ 13.3
CDK5RAP3-217ENST00000580287 DOCK3Q8IZD9 2030 aa13.98□□□□□ -0.17
CDK5RAP3-217ENST00000580287 FRMD3A2A2Y4 597 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SLC26A4O43511 780 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 HIP1RO75146 1068 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PRPF6O94906 941 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TBC1D8O95759 1140 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SUPT20HL2P0C7V6 817 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 INHBEP58166 350 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 IRX5P78411 483 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 PRKCEQ02156 737 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 DEFB115Q30KQ5 88 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ARHGAP29Q52LW3 1261 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TTI2Q6NXR4 508 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 IRF2BP1Q8IU81 584 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CSGALNACT2Q8N6G5 542 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SCFD1Q8WVM8 642 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ZFYVE28Q9HCC9 887 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ASB14A6NK59 587 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CYP2C19P33261 490 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TCF7P36402 384 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TM4SF4P48230 202 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 FXR1P51114 621 aaKnown RBP eCLIP13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 KRT222Q8N1A0 295 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 NEK9Q8TD19 979 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 P2RX5Q93086 422 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CEP170P1Q96L14 293 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CAPNS2Q96L46 248 aa13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 CCDC43Q96MW1 224 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 SEPT9Q9UHD8 586 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ZNFX1Q9P2E3 1918 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-217ENST00000580287 B4DLN1 442 aa13.96□□□□□ -0.17
CDK5RAP3-217ENST00000580287 ADCY6O43306 1168 aa13.96□□□□□ -0.17
CDK5RAP3-217ENST00000580287 MFAP3LO75121 409 aa13.96□□□□□ -0.17
CDK5RAP3-217ENST00000580287 TBCAO75347 108 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-217ENST00000580287 FAM13AO94988 1023 aa13.96□□□□□ -0.17
CDK5RAP3-217ENST00000580287 GYPCP04921 128 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms