RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 VN1R2Q8NFZ6 395 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 EDAQ92838 391 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 LENG9Q96B70 501 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 FBXL18Q96ME1 805 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 ZNF577Q9BSK1 485 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 ADAMTS10Q9H324 1103 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 CWH43Q9H720 699 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 ELAC1Q9H777 363 aaKnown RBP12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 TLE6Q9H808 572 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 PCDHA10Q9Y5I2 948 aa12.09□□□□□ -0.47
CSNK1D-210ENST00000579308 CCDC196A0A1B0GTZ2 297 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 PER2O15055 1255 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 FGF18O76093 207 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 VTNP04004 478 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 FGFR1P11362 822 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 CPA1P15085 419 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 METAP2P50579 478 aaKnown RBP eCLIP12.08□□□□□ -0.488e-7■□□□□ 9.4
CSNK1D-210ENST00000579308 NHLH1Q02575 133 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 KCNC3Q14003 757 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 DUSP6Q16828 381 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 PDE12Q6L8Q7 609 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 TMEM184AQ6ZMB5 413 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 LRRC55Q6ZSA7 311 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 BMP8AQ7Z5Y6 402 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 ALYREFQ86V81 257 aaKnown RBP12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 SUSD6Q92537 303 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 MFSD14AQ96MC6 490 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 CDCA3Q99618 268 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 OSMRQ99650 979 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 TLR9Q9NR96 1032 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 AAASQ9NRG9 546 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 RNF19AQ9NV58 838 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 TMEM161AQ9NX61 479 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 LZTS1Q9Y250 596 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 USP15Q9Y4E8 981 aaPredicted RBP12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 NLRC5Q86WI3 1866 aa12.08□□□□□ -0.48
CSNK1D-210ENST00000579308 NID2Q14112 1375 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 MAGEB2O15479 319 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 ZNF862O60290 1169 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 PSAPP07602 524 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 RBM10P98175 930 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 SETQ01105 290 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 PLCB3Q01970 1234 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 NTRK3Q16288 839 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 PRR16Q569H4 304 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 CKAP2LQ8IYA6 745 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 REXO1Q8N1G1 1221 aaKnown RBP12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 METTL13Q8N6R0 699 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 MICAL1Q8TDZ2 1067 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 CASD1Q96PB1 797 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 PPP1R16BQ96T49 567 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 PHF7Q9BWX1 381 aaPredicted RBP12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 AGXT2Q9BYV1 514 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 S1PR5Q9H228 398 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 ATP6V0A4Q9HBG4 840 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 C6orf50Q9HD87 102 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 GABBR1Q9UBS5 961 aa12.07□□□□□ -0.48
CSNK1D-210ENST00000579308 ATG2AQ2TAZ0 1938 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 CDC45O75419 566 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 ATF7P17544 494 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 IBSPP21815 317 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 GNA11P29992 359 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 CLCN3P51790 818 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 NLRP11P59045 1033 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 ZXDAP98168 799 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 SPOUT1Q5T280 376 aaKnown RBP12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 EFCAB12Q6NXP0 572 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 TRIM67Q6ZTA4 783 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 Q6ZUG5 572 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 CENPQQ7L2Z9 268 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 ZNF710Q8N1W2 664 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 RASGRP4Q8TDF6 673 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 FAM167AQ96KS9 214 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 TMEM117Q9H0C3 514 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 CEP131Q9UPN4 1083 aa12.06□□□□□ -0.48
CSNK1D-210ENST00000579308 TECTAO75443 2155 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 FSD2A1L4K1 749 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 TMEM221A6NGB7 291 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 M0R296 226 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 MSH4O15457 936 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 LAG3P18627 525 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 EIF4BP23588 611 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 HSPA4P34932 840 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 USP11P51784 963 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 EVCP57679 992 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 TARBP2Q15633 366 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 TRMT1LQ7Z2T5 733 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 ZNF598Q86UK7 904 aaKnown RBP12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 ECHDC2Q86YB7 292 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 THNSL1Q8IYQ7 743 aa12.05□□□□□ -0.48
CSNK1D-210ENST00000579308 MRPS27Q92552 414 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms