RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 POLGP54098 1239 aaPredicted RBP17.17■□□□□ 0.34
IFT20-208ENST00000578985 NUCB2P80303 420 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 DNM1Q05193 864 aaKnown RBP17.17■□□□□ 0.34
IFT20-208ENST00000578985 MGAT3Q09327 533 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 TMEM62Q0P6H9 643 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 MBTPS1Q14703 1052 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 ZRSR1Q15695 479 aaKnown RBP17.17■□□□□ 0.34
IFT20-208ENST00000578985 IER5Q5VY09 327 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 C16orf59Q7L2K0 433 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 DBR1Q9UK59 544 aaKnown RBP17.17■□□□□ 0.34
IFT20-208ENST00000578985 COLQQ9Y215 455 aaPredicted RBP17.17■□□□□ 0.34
IFT20-208ENST00000578985 AKT3Q9Y243 479 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 TRPV2Q9Y5S1 764 aa17.17■□□□□ 0.34
IFT20-208ENST00000578985 SPTLC2O15270 562 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 SLC26A4O43511 780 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 NBNO60934 754 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 PFKMP08237 780 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 UBA7P41226 1012 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 DNM2P50570 870 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 MKRN4PQ13434 485 aaPredicted RBP17.16■□□□□ 0.34
IFT20-208ENST00000578985 GPNMBQ14956 572 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 TMEM240Q5SV17 173 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
IFT20-208ENST00000578985 ZNF365Q70YC5 407 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 CABP7Q86V35 215 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 KRI1Q8N9T8 703 aaKnown RBP17.16■□□□□ 0.34
IFT20-208ENST00000578985 SLC7A3Q8WY07 619 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 VWCEQ96DN2 955 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 CLIC6Q96NY7 704 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 CELF4Q9BZC1 486 aaKnown RBP17.16■□□□□ 0.34
IFT20-208ENST00000578985 CSRNP2Q9H175 543 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 DHX33Q9H6R0 707 aaKnown RBP17.16■□□□□ 0.34
IFT20-208ENST00000578985 DDX19AQ9NUU7 478 aaKnown RBP17.16■□□□□ 0.34
IFT20-208ENST00000578985 CFAP45Q9UL16 551 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 ATP6V1DQ9Y5K8 247 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 KDM3AQ9Y4C1 1321 aa17.16■□□□□ 0.34
IFT20-208ENST00000578985 SZT2Q5T011 3432 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 DNAH12Q6ZR08 3092 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 ARHGEF35A5YM69 484 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 PPP6R2O75170 966 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 FGBP02675 491 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 CXCL10P02778 98 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 VTNP04004 478 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 DRP2Q13474 957 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 EMC2Q15006 297 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 SHHQ15465 462 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 HYIQ5T013 277 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 PNMA5Q96PV4 448 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.15■□□□□ 0.34
IFT20-208ENST00000578985 OSBPL7Q9BZF2 842 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
IFT20-208ENST00000578985 SUCLA2Q9P2R7 463 aaPredicted RBP17.15■□□□□ 0.34
IFT20-208ENST00000578985 DNM3Q9UQ16 869 aa17.15■□□□□ 0.34
IFT20-208ENST00000578985 DGAT1O75907 488 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 GRB10Q13322 594 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 KIZQ2M2Z5 673 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 SPECC1Q5M775 1068 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 C9orf50Q5SZB4 431 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 ZNF710Q8N1W2 664 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 KCNG4Q8TDN1 519 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 CALML4Q96GE6 196 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 PPP1R16BQ96T49 567 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 PLIN2Q99541 437 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 MTRQ99707 1265 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 CCSER1Q9C0I3 900 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 NT5C3AQ9H0P0 336 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 BHMT2Q9H2M3 363 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 ATP6V0A4Q9HBG4 840 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 GINS2Q9Y248 185 aa17.14■□□□□ 0.33
IFT20-208ENST00000578985 E9PMD0 336 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 GAS2O43903 313 aaKnown RBP17.13■□□□□ 0.33
IFT20-208ENST00000578985 USO1O60763 962 aaKnown RBP17.13■□□□□ 0.33
IFT20-208ENST00000578985 GPR32O75388 356 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 EYA4O95677 639 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 GHRP10912 638 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 ACTN1P12814 892 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
IFT20-208ENST00000578985 CRYBB1P53674 252 aaPredicted RBP17.13■□□□□ 0.33
IFT20-208ENST00000578985 NLRP11P59045 1033 aaKnown RBP17.13■□□□□ 0.33
IFT20-208ENST00000578985 KRT85P78386 507 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 LPIN1Q14693 890 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 TMEM119Q4V9L6 283 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 FBXO47Q5MNV8 452 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 CNKSR3Q6P9H4 555 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 TDHQ8IZJ6 230 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 KCTD17Q8N5Z5 321 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 RASSF8Q8NHQ8 419 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 TCP11Q8WWU5 503 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 TMEM143Q96AN5 459 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 CHAMP1Q96JM3 812 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 CDHR5Q9HBB8 845 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 XPNPEP1Q9NQW7 623 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
IFT20-208ENST00000578985 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
IFT20-208ENST00000578985 SQORQ9Y6N5 450 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms