RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 GATA6Q92908 595 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 MAP4K1Q92918 833 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TCF25Q9BQ70 676 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 LNPKQ9C0E8 428 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 KAT14Q9H8E8 782 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 HELLSQ9NRZ9 838 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 C1orf112Q9NSG2 853 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 DZANK1Q9NVP4 752 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TMEM260Q9NX78 707 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 ERAP1Q9NZ08 941 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 LRFN2Q9ULH4 789 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PADI3Q9ULW8 664 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 WASF3Q9UPY6 502 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 PCDHA1Q9Y5I3 950 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 TRPV2Q9Y5S1 764 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 CELSR3Q9NYQ7 3312 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 DOCK5Q9H7D0 1870 aa8.28□□□□□ -1.08
CDK5RAP3-209ENST00000578663 SPTAN1Q13813 2472 aaKnown RBP8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GCOM1H8Y6P7 765 aaPredicted RBP8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 M0QZ92 97 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TM4SF5O14894 197 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZBTB5O15062 677 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PPFIA3O75145 1194 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 POLR2MP0CAP2 368 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 HOXA13P31271 388 aaPredicted RBP8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 MRPS9P82933 396 aaKnown RBP8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SPEM2Q0P670 501 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 MARCH8Q5T0T0 291 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SPOUT1Q5T280 376 aaKnown RBP8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 UTP14CQ5TAP6 766 aaKnown RBP8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PLPP4Q5VZY2 271 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 CHD1LQ86WJ1 897 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SKAP1Q86WV1 359 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TBC1D10CQ8IV04 446 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 C1orf210Q8IVY1 113 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZCCHC14Q8WYQ9 949 aaKnown RBP8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PIK3R5Q8WYR1 880 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 KIF12Q96FN5 646 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 BORCS6Q96GS4 357 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 EPC1Q9H2F5 836 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 BCAS3Q9H6U6 928 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ENTPD7Q9NQZ7 604 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 DUSP12Q9UNI6 340 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GTF3C3Q9Y5Q9 886 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 HCFC2Q9Y5Z7 792 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SALL3Q9BXA9 1300 aa8.27□□□□□ -1.09
CDK5RAP3-209ENST00000578663 C2orf16Q68DN1 1984 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 KRBA1A5PL33 1030 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TRIM6-TRIM34B2RNG4 842 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PPP1R11O60927 126 aaPredicted RBP8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 EOMESO95936 686 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 DCNP07585 359 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SPINK2P20155 84 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PDE4AP27815 886 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TCF7P36402 384 aaPredicted RBP8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GATMP50440 423 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TBC1D8BQ0IIM8 1120 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ODR4Q5SWX8 454 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SLC24A5Q71RS6 500 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TNPO1Q92973 898 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SECISBP2LQ93073 1101 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ACSF2Q96CM8 615 aaPredicted RBP8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 CDHR1Q96JP9 859 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 APOL5Q9BWW9 433 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TMX1Q9H3N1 280 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 CWH43Q9H720 699 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ELAC1Q9H777 363 aaKnown RBP8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 CYP26B1Q9NR63 512 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 LIMD1Q9UGP4 676 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PCDHB7Q9Y5E2 793 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 LAMA1P25391 3075 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 NEDD4P46934 1319 aa8.26□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ITPR3Q14573 2671 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TBKBP1A7MCY6 615 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 HIDE1A8MVS5 230 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 C9IYK1 514 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 HOXA2O43364 376 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 LILRB5O75023 590 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GLULP15104 373 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 MX1P20591 662 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 HAND2P61296 217 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 KRT17Q04695 432 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 TDGQ13569 410 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SMC1AQ14683 1233 aaKnown RBP8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 MCMDC2Q4G0Z9 681 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SPECC1Q5M775 1068 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ATAT1Q5SQI0 421 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 PCNX4Q63HM2 1172 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 LLGL2Q6P1M3 1020 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 NLRX1Q86UT6 975 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 FCHSD1Q86WN1 690 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 NME8Q8N427 588 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ENAHQ8N8S7 591 aaPredicted RBP8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 MRPL43Q8N983 215 aaKnown RBP8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 SEPT1Q8WYJ6 367 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 DDX1Q92499 740 aaKnown RBP8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 EVI5LQ96CN4 794 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 GPRASP2Q96D09 838 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZNF558Q96NG5 402 aa8.25□□□□□ -1.09
CDK5RAP3-209ENST00000578663 ZSCAN10Q96SZ4 725 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms