RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 TRPV2Q9Y5S1 764 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 CDY2AQ9Y6F7 541 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 SQORQ9Y6N5 450 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 KDM3AQ9Y4C1 1321 aa12.86□□□□□ -0.35
ERBB2-208ENST00000578630 A0A087WWV3 80 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 IGKV6-21A0A0C4DH24 114 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 ARHGEF35A5YM69 484 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 TMEM150BA6NC51 233 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 SPTLC2O15270 562 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 ASAP2O43150 1006 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 PPP6R2O75170 966 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 CHRNA1P02708 482 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 TMEM240Q5SV17 173 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 FAM43BQ6ZT52 329 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-208ENST00000578630 ZNF365Q70YC5 407 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 CABP7Q86V35 215 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 TDHQ8IZJ6 230 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 LRRC71Q8N4P6 559 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 RASSF8Q8NHQ8 419 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 SEPT8Q92599 483 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 CEP89Q96ST8 783 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 MTRQ99707 1265 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 DHX33Q9H6R0 707 aaKnown RBP12.85□□□□□ -0.35
ERBB2-208ENST00000578630 DDX19AQ9NUU7 478 aaKnown RBP12.85□□□□□ -0.35
ERBB2-208ENST00000578630 SUCLA2Q9P2R7 463 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-208ENST00000578630 CCDC39Q9UFE4 941 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 GINS2Q9Y248 185 aa12.85□□□□□ -0.35
ERBB2-208ENST00000578630 PP2D1A8MPX8 630 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 NBNO60934 754 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 CXCL10P02778 98 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 TXLNAP40222 546 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 RARRES1P49788 294 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 CLCN3P51790 818 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 CRYBB1P53674 252 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-208ENST00000578630 NLRP11P59045 1033 aaKnown RBP12.84□□□□□ -0.35
ERBB2-208ENST00000578630 DNM1Q05193 864 aaKnown RBP12.84□□□□□ -0.35
ERBB2-208ENST00000578630 MGAT3Q09327 533 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 TMEM62Q0P6H9 643 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 IKBKEQ14164 716 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 SHHQ15465 462 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 CNKSR3Q6P9H4 555 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 TRAF7Q6Q0C0 670 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 POTEGQ6S5H5 508 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 C16orf59Q7L2K0 433 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 ZNF579Q8NAF0 562 aaKnown RBP12.84□□□□□ -0.35
ERBB2-208ENST00000578630 KCNG4Q8TDN1 519 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
ERBB2-208ENST00000578630 CCSER1Q9C0I3 900 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 CSRNP2Q9H175 543 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 PRO3102Q9H379 93 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 ATP6V0A4Q9HBG4 840 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 PCDH10Q9P2E7 1040 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 ZDHHC9Q9Y397 364 aa12.84□□□□□ -0.35
ERBB2-208ENST00000578630 TNRC18O15417 2968 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-208ENST00000578630 ABHD14A-ACY1A0A1B0GW23 586 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 EFCAB14O75071 495 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 EYA4O95677 639 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 VTNP04004 478 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 NCLP19338 710 aaKnown RBP12.83□□□□□ -0.36
ERBB2-208ENST00000578630 EPHB4P54760 987 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 KRT85P78386 507 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-208ENST00000578630 GPNMBQ14956 572 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 ECM1Q16610 540 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 HYIQ5T013 277 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 PADI6Q6TGC4 694 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 OTOP2Q7RTS6 562 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 LINC01465Q8N7H1 131 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 MCPH1Q8NEM0 835 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 DBF4BQ8NFT6 615 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 PSPC1Q8WXF1 523 aaKnown RBP12.83□□□□□ -0.36
ERBB2-208ENST00000578630 HERVK_113Q902F9 699 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 APBB2Q92870 758 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 RNPC3Q96LT9 517 aaKnown RBP12.83□□□□□ -0.36
ERBB2-208ENST00000578630 SCLT1Q96NL6 688 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 MMTAG2Q9BU76 263 aaKnown RBP12.83□□□□□ -0.36
ERBB2-208ENST00000578630 GCOM2Q9BZD3 368 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-208ENST00000578630 INO80BQ9C086 356 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-208ENST00000578630 FBXO2Q9UK22 296 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-208ENST00000578630 RCOR1Q9UKL0 485 aa12.83□□□□□ -0.36
ERBB2-208ENST00000578630 ZBBXA8MT70 800 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 GPR182O15218 404 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 CUTAO60888 179 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 GPR32O75388 356 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 RPS6KA5O75582 802 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 BAIAP3O94812 1187 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 GHRP10912 638 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 CYP11B2P19099 503 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 GRIN1Q05586 938 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 MKRN4PQ13434 485 aaPredicted RBP12.82□□□□□ -0.36
ERBB2-208ENST00000578630 MBTPS1Q14703 1052 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 EMC2Q15006 297 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 KIZQ2M2Z5 673 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 PLEKHG4Q58EX7 1191 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 FBXO47Q5MNV8 452 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 C9orf50Q5SZB4 431 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 ZNF410Q86VK4 478 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 RHPN2Q8IUC4 686 aa12.82□□□□□ -0.36
ERBB2-208ENST00000578630 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms