RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 KCNQ2O43526 872 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 PPP1R37O75864 691 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 BEND6Q5SZJ8 279 aaPredicted RBP11.73□□□□□ -0.53
RNF43-203ENST00000577716 DCAF15Q66K64 600 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 MIGA2Q7L4E1 593 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 RFX6Q8HWS3 928 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 GBP5Q96PP8 586 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 MIS12Q9H081 205 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 F5H6K3 240 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 MSH2P43246 934 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 TPD52P55327 224 aaPredicted RBP11.73□□□□□ -0.53
RNF43-203ENST00000577716 BASP1P80723 227 aaKnown RBP11.73□□□□□ -0.53
RNF43-203ENST00000577716 KLRC3Q07444 240 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 BBS9Q3SYG4 887 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 MTERF2Q49AM1 385 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 HNRNPLLQ8WVV9 542 aaKnown RBP11.73□□□□□ -0.53
RNF43-203ENST00000577716 DYDC2Q96IM9 177 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 CALN1Q9BXU9 219 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 SLITRK6Q9H5Y7 841 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 FHOD1Q9Y613 1164 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 WDR91A4D1P6 747 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 ZRANB2O95218 330 aaKnown RBP eCLIP11.73□□□□□ -0.53
RNF43-203ENST00000577716 FTLP02792 175 aaPredicted RBP11.73□□□□□ -0.53
RNF43-203ENST00000577716 TFAMQ00059 246 aaKnown RBP11.73□□□□□ -0.53
RNF43-203ENST00000577716 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 NXF1Q9UBU9 619 aaKnown RBP11.73□□□□□ -0.53
RNF43-203ENST00000577716 HPCAL4Q9UM19 191 aa11.73□□□□□ -0.53
RNF43-203ENST00000577716 ZNF233A6NK53 670 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 INO80B-WBP1J3KQ70 363 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 RAD17O75943 681 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 CD58P19256 250 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 KLK7P49862 253 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 ERVK-24P63145 666 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 RCN2Q14257 317 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 RFFLQ8WZ73 363 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 PNKPQ96T60 521 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 ADPGKQ9BRR6 497 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 HEMGNQ9BXL5 484 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 INO80BQ9C086 356 aaPredicted RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 MLXIPLQ9NP71 852 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 PMS2P54278 862 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 SF3B3Q15393 1217 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 ZNF449Q6P9G9 518 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 FAM47EQ6ZV65 393 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 FAM160B2Q86V87 743 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 TRIM50Q86XT4 487 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 THOC1Q96FV9 657 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 PITPNM3Q9BZ71 974 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 RBM12Q9NTZ6 932 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 LUC7L3O95232 432 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 KRT14P02533 472 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 MT-ND3P03897 115 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 CRKP46108 304 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 SLC12A2P55011 1212 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 HDLBPQ00341 1268 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 NTRK3Q16288 839 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 RCSD1Q6JBY9 416 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 SMIM5Q71RC9 77 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 SRRM1Q8IYB3 904 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 RPUSD2Q8IZ73 545 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 GABPB2Q8TAK5 448 aaPredicted RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 PXDNQ92626 1479 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 PDS5AQ29RF7 1337 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 USP11P51784 963 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 PRELPP51888 382 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 PDE1BQ01064 536 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 RNASELQ05823 741 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 PPP2R5CQ13362 524 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 CCDC125Q86Z20 511 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 CLEC10AQ8IUN9 316 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 AFAP1L2Q8N4X5 818 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 PDCD7Q8N8D1 485 aaKnown RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 GBP7Q8N8V2 638 aaPredicted RBP11.72□□□□□ -0.53
RNF43-203ENST00000577716 BANK1Q8NDB2 785 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 TXLNGQ9NUQ3 528 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 ADAM22Q9P0K1 906 aa11.72□□□□□ -0.53
RNF43-203ENST00000577716 MYO5BQ9ULV0 1848 aa11.71□□□□□ -0.53
RNF43-203ENST00000577716 FRMD5Q7Z6J6 570 aa11.71□□□□□ -0.53
RNF43-203ENST00000577716 CCHCR1Q8TD31 782 aa11.71□□□□□ -0.53
RNF43-203ENST00000577716 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
RNF43-203ENST00000577716 TDRD3Q9H7E2 651 aaKnown RBP11.71□□□□□ -0.53
RNF43-203ENST00000577716 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.53
RNF43-203ENST00000577716 STXBP3O00186 592 aa11.71□□□□□ -0.53
RNF43-203ENST00000577716 MCF2LO15068 1137 aa11.71□□□□□ -0.53
RNF43-203ENST00000577716 PDIK1LQ8N165 341 aa11.71□□□□□ -0.53
RNF43-203ENST00000577716 N4BP2L2Q92802 583 aaPredicted RBP11.71□□□□□ -0.53
RNF43-203ENST00000577716 RNPC3Q96LT9 517 aaKnown RBP11.71□□□□□ -0.53
RNF43-203ENST00000577716 PSD3Q9NYI0 1048 aa11.71□□□□□ -0.53
RNF43-203ENST00000577716 SEL1LQ9UBV2 794 aa11.71□□□□□ -0.53
RNF43-203ENST00000577716 K7ERI5 159 aa11.71□□□□□ -0.54
RNF43-203ENST00000577716 CRCPO75575 148 aa11.71□□□□□ -0.54
RNF43-203ENST00000577716 RINT1Q6NUQ1 792 aa11.71□□□□□ -0.54
RNF43-203ENST00000577716 PPP1R2P3Q6NXS1 205 aa11.71□□□□□ -0.54
RNF43-203ENST00000577716 CCT6BQ92526 530 aa11.71□□□□□ -0.54
RNF43-203ENST00000577716 MTMR4Q9NYA4 1195 aa11.71□□□□□ -0.54
RNF43-203ENST00000577716 RGL1Q9NZL6 768 aa11.71□□□□□ -0.54
RNF43-203ENST00000577716 NPHP3-ACAD11A0A0J9YXS1 232 aa11.7□□□□□ -0.54
RNF43-203ENST00000577716 PDXKO00764 312 aa11.7□□□□□ -0.54
RNF43-203ENST00000577716 GMNNO75496 209 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms