RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 GDPD5Q8WTR4 605 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 FOXD4L4Q8WXT5 416 aaPredicted RBP11.91□□□□□ -0.5
LITAF-216ENST00000574848 WASF1Q92558 559 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 UIMC1Q96RL1 719 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 YME1L1Q96TA2 773 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
LITAF-216ENST00000574848 ZSCAN16Q9H4T2 348 aaPredicted RBP11.91□□□□□ -0.5
LITAF-216ENST00000574848 KCNMB3Q9NPA1 279 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 KCNJ14Q9UNX9 436 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 ATG2AQ2TAZ0 1938 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 EVPLQ92817 2033 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 XIRP2A4UGR9 3374 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 C5orf67F2Z3F1 127 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 ENPP3O14638 875 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 MAGEB2O15479 319 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 SLC37A4O43826 429 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 PRPF40AO75400 957 aaKnown RBP11.9□□□□□ -0.5
LITAF-216ENST00000574848 TMEM62Q0P6H9 643 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 PAK2Q13177 524 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 UGCGQ16739 394 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 INF2Q27J81 1249 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 NEK8Q86SG6 692 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 CKAP2LQ8IYA6 745 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 ZNF710Q8N1W2 664 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 TMEM87AQ8NBN3 555 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 NSUN7Q8NE18 718 aaKnown RBP11.9□□□□□ -0.5
LITAF-216ENST00000574848 FBXO22Q8NEZ5 403 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 TMEM40Q8WWA1 233 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 PPM1EQ8WY54 764 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 SYMPKQ92797 1274 aaKnown RBP11.9□□□□□ -0.5
LITAF-216ENST00000574848 TNFRSF25Q93038 417 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 ZNF689Q96CS4 500 aaPredicted RBP11.9□□□□□ -0.5
LITAF-216ENST00000574848 NAP1L4Q99733 375 aaKnown RBP11.9□□□□□ -0.5
LITAF-216ENST00000574848 C17orf80Q9BSJ5 609 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 LMBRD1Q9NUN5 540 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 ORC3Q9UBD5 711 aaPredicted RBP11.9□□□□□ -0.5
LITAF-216ENST00000574848 DDX25Q9UHL0 483 aaKnown RBP11.9□□□□□ -0.5
LITAF-216ENST00000574848 PADI3Q9ULW8 664 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 SAMM50Q9Y512 469 aa11.9□□□□□ -0.5
LITAF-216ENST00000574848 CCDC194A0A1B0GVG4 234 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 TBX3O15119 743 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 GPR32O75388 356 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 DGKIO75912 1065 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 CRYBB1P53674 252 aaPredicted RBP11.89□□□□□ -0.51
LITAF-216ENST00000574848 KRT85P78386 507 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 PPP2R5CQ13362 524 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 TARBP2Q15633 366 aaKnown RBP11.89□□□□□ -0.51
LITAF-216ENST00000574848 CCDC85BQ15834 202 aaPredicted RBP11.89□□□□□ -0.51
LITAF-216ENST00000574848 EPC2Q52LR7 807 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 ODR4Q5SWX8 454 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 KRT40Q6A162 431 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 RTN4RL1Q86UN2 441 aaPredicted RBP11.89□□□□□ -0.51
LITAF-216ENST00000574848 NPAS4Q8IUM7 802 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 CLP1Q92989 425 aaKnown RBP11.89□□□□□ -0.51
LITAF-216ENST00000574848 FAM20AQ96MK3 541 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 ASB2Q96Q27 587 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 CEP89Q96ST8 783 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 TMX1Q9H3N1 280 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 GJB4Q9NTQ9 266 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 VAV3Q9UKW4 847 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 COG5Q9UP83 839 aa11.89□□□□□ -0.51
LITAF-216ENST00000574848 TTC28Q96AY4 2481 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 GOLGA6L3A6NEY3 463 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 H3BNC9 293 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 CHMP2AO43633 222 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 UPP2O95045 317 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 STBD1O95210 358 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 MRPS5P82675 430 aaKnown RBP11.88□□□□□ -0.51
LITAF-216ENST00000574848 LETM2Q2VYF4 491 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 MIER3Q7Z3K6 550 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 TMEM192Q8IY95 271 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 CMTR2Q8IYT2 770 aaKnown RBP11.88□□□□□ -0.51
LITAF-216ENST00000574848 MICALL1Q8N3F8 863 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 OXER1Q8TDS5 423 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 GJA10Q969M2 543 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 NIFKQ9BYG3 293 aaKnown RBP11.88□□□□□ -0.51
LITAF-216ENST00000574848 NRBP2Q9NSY0 501 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 MTUS1Q9ULD2 1270 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 NOC2LQ9Y3T9 749 aaKnown RBP11.88□□□□□ -0.51
LITAF-216ENST00000574848 RWDD3Q9Y3V2 267 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 MUC3AQ02505 3323 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 ARID2Q68CP9 1835 aa11.88□□□□□ -0.51
LITAF-216ENST00000574848 FNDC1Q4ZHG4 1894 aaPredicted RBP11.87□□□□□ -0.51
LITAF-216ENST00000574848 IGKV6-21A0A0C4DH24 114 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 JAK2O60674 1132 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 RPS6KA5O75582 802 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 MMP1P03956 469 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 RB1P06400 928 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 KRT2P35908 639 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 SARSP49591 514 aaKnown RBP11.87□□□□□ -0.51
LITAF-216ENST00000574848 CLCN3P51790 818 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 KIZQ2M2Z5 673 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 XKR3Q5GH77 459 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
LITAF-216ENST00000574848 ATL3Q6DD88 541 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 PIK3AP1Q6ZUJ8 805 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 FAM228AQ86W67 206 aa11.87□□□□□ -0.51
LITAF-216ENST00000574848 FIBCD1Q8N539 461 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms