RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 AIFM3Q96NN9 605 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 UNC45AQ9H3U1 944 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 EPHX3Q9H6B9 360 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 C1orf112Q9NSG2 853 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 NRBP2Q9NSY0 501 aa23.86■■□□□ 1.41
CHRNB1-206ENST00000574054 GRXCR2A6NFK2 248 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 NCK2O43639 380 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 GPR32O75388 356 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 TDP2O95551 362 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 TMOD1P28289 359 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 SFNP31947 248 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 HYAL1Q12794 435 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 UGCGQ16739 394 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 SPOUT1Q5T280 376 aaKnown RBP23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 SLC24A5Q71RS6 500 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 P2RX5Q93086 422 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 IGFLR1Q9H665 355 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 CD320Q9NPF0 282 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 RGS18Q9NS28 235 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 RNF216Q9NWF9 866 aaPredicted RBP23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 RAPGEFL1Q9UHV5 662 aa23.85■■□□□ 1.41
CHRNB1-206ENST00000574054 TBKBP1A7MCY6 615 aa23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 ITGB1P05556 798 aa23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 SSTR3P32745 418 aaPredicted RBP23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 COL19A1Q14993 1142 aa23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 Q4G0T1 1027 aa23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 NAALADL2Q58DX5 795 aa23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 FAM43BQ6ZT52 329 aaPredicted RBP23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 FAM178BQ8IXR5 827 aa23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 KLHL23Q8NBE8 558 aa23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 SCLT1Q96NL6 688 aa23.84■■□□□ 1.41
CHRNB1-206ENST00000574054 NLRP11P59045 1033 aaKnown RBP23.83■■□□□ 1.41
CHRNB1-206ENST00000574054 CLUL1Q15846 466 aa23.83■■□□□ 1.41
CHRNB1-206ENST00000574054 MIER3Q7Z3K6 550 aa23.83■■□□□ 1.41
CHRNB1-206ENST00000574054 GJD3Q8N144 294 aa23.83■■□□□ 1.41
CHRNB1-206ENST00000574054 KHSRPQ92945 711 aaKnown RBP eCLIP23.83■■□□□ 1.41
CHRNB1-206ENST00000574054 ZNF668Q96K58 619 aaPredicted RBP23.83■■□□□ 1.41
CHRNB1-206ENST00000574054 FAM50BQ9Y247 325 aa23.83■■□□□ 1.41
CHRNB1-206ENST00000574054 C9IYK1 514 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 PSMD10O75832 226 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 CDKL5O76039 1030 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 DNAJB1P25685 340 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 GTF2F1P35269 517 aaKnown RBP eCLIP23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 TBC1D8BQ0IIM8 1120 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 NONOQ15233 471 aaKnown RBP eCLIP23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 FAM102BQ5T8I3 360 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 GALNT17Q6IS24 598 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 DAGLBQ8NCG7 672 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 SPPL3Q8TCT6 385 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 ATP6V0A4Q9HBG4 840 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 KCNJ14Q9UNX9 436 aa23.82■■□□□ 1.4
CHRNB1-206ENST00000574054 ATG2AQ2TAZ0 1938 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 M0R2N6 131 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 CAMK1Q14012 370 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 NPY5RQ15761 445 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 INF2Q27J81 1249 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 KRT25Q7Z3Z0 450 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 FAM177A1Q8N128 213 aaPredicted RBP23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 LINC01465Q8N7H1 131 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 POF1BQ8WVV4 589 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 PPP2R3CQ969Q6 453 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 ADAMTS10Q9H324 1103 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 SEPT9Q9UHD8 586 aaPredicted RBP23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 PCDHB12Q9Y5F1 795 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 KIAA1671Q9BY89 1806 aa23.81■■□□□ 1.4
CHRNB1-206ENST00000574054 CYP3A7-CYP3A51PA0A087WV96 503 aa23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 FGFR1P11362 822 aa23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 CYP3A7P24462 503 aa23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 LTBRP36941 435 aa23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 DSC3Q14574 896 aa23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 RDM1Q8NG50 284 aa23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 SLKQ9H2G2 1235 aaPredicted RBP23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 AAASQ9NRG9 546 aa23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 TMEM161AQ9NX61 479 aa23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 DDX25Q9UHL0 483 aaKnown RBP23.8■■□□□ 1.4
CHRNB1-206ENST00000574054 C5orf42Q9H799 3197 aa23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 EIF4BP23588 611 aaKnown RBP23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 IRS1P35568 1242 aa23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 DLX2Q07687 328 aaPredicted RBP23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 SCRN1Q12765 414 aa23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 CTC1Q2NKJ3 1217 aa23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 MTERF2Q49AM1 385 aa23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 ZNF710Q8N1W2 664 aa23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 ETNPPLQ8TBG4 499 aa23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 NLRP7Q8WX94 980 aa23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 HCSTQ9UBK5 93 aa23.79■■□□□ 1.4
CHRNB1-206ENST00000574054 WDR81Q562E7 1941 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 CCDC194A0A1B0GVG4 234 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 LINC01565O15544 149 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 DTNBO60941 627 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 ZSCAN20P17040 1043 aaPredicted RBP23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 GPC3P51654 580 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 FAM189BP81408 668 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 LETM2Q2VYF4 491 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 XKR3Q5GH77 459 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 TMEM31Q5JXX7 168 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 MOXD1Q6UVY6 613 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 ADGRD2Q7Z7M1 963 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 MBOAT7Q96N66 472 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 TYW1Q9NV66 732 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms