RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 JAKMIP1Q96N16 626 aaKnown RBP24.93■■□□□ 1.58
SNF8-216ENST00000573795 C6orf50Q9HD87 102 aa24.93■■□□□ 1.58
SNF8-216ENST00000573795 PIEZO1Q92508 2521 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 GPR182O15218 404 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 HSPA4P34932 840 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 FAM189BP81408 668 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 FGD1P98174 961 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 PRR16Q569H4 304 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 RBM23Q86U06 439 aaKnown RBP24.92■■□□□ 1.58
SNF8-216ENST00000573795 CKAP2LQ8IYA6 745 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 FBXL16Q8N461 479 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 SMRP1Q8NCR6 262 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 POP1Q99575 1024 aaKnown RBP24.92■■□□□ 1.58
SNF8-216ENST00000573795 AGXT2Q9BYV1 514 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 CWH43Q9H720 699 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 GABBR1Q9UBS5 961 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 MUTYHQ9UIF7 546 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 PCDHA10Q9Y5I2 948 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 TECTAO75443 2155 aa24.92■■□□□ 1.58
SNF8-216ENST00000573795 PPFIA3O75145 1194 aa24.91■■□□□ 1.58
SNF8-216ENST00000573795 FGFR1P11362 822 aa24.91■■□□□ 1.58
SNF8-216ENST00000573795 CLCN3P51790 818 aa24.91■■□□□ 1.58
SNF8-216ENST00000573795 COASYQ13057 564 aa24.91■■□□□ 1.58
SNF8-216ENST00000573795 HERC4Q5GLZ8 1057 aaPredicted RBP24.91■■□□□ 1.58
SNF8-216ENST00000573795 MCTP2Q6DN12 878 aa24.91■■□□□ 1.58
SNF8-216ENST00000573795 TRMT1LQ7Z2T5 733 aaKnown RBP24.91■■□□□ 1.58
SNF8-216ENST00000573795 RNF135Q8IUD6 432 aa24.91■■□□□ 1.58
SNF8-216ENST00000573795 CCDC12Q8WUD4 166 aaPredicted RBP24.91■■□□□ 1.58
SNF8-216ENST00000573795 UPF3BQ9BZI7 483 aaKnown RBP24.91■■□□□ 1.58
SNF8-216ENST00000573795 RNF19AQ9NV58 838 aa24.91■■□□□ 1.58
SNF8-216ENST00000573795 TYW1Q9NV66 732 aaKnown RBP24.91■■□□□ 1.58
SNF8-216ENST00000573795 BARX2Q9UMQ3 279 aaPredicted RBP24.91■■□□□ 1.58
SNF8-216ENST00000573795 ZNF862O60290 1169 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 PSAPP07602 524 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 RBM10P98175 930 aaKnown RBP24.9■■□□□ 1.58
SNF8-216ENST00000573795 UBE3AQ05086 875 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 CSPP1Q1MSJ5 1256 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 ODR4Q5SWX8 454 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 METTL13Q8N6R0 699 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 COLGALT1Q8NBJ5 622 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 VN1R2Q8NFZ6 395 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 TMEM161AQ9NX61 479 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 PCDHB12Q9Y5F1 795 aa24.9■■□□□ 1.58
SNF8-216ENST00000573795 FGF18O76093 207 aa24.89■■□□□ 1.58
SNF8-216ENST00000573795 RPS6KB1P23443 525 aa24.89■■□□□ 1.58
SNF8-216ENST00000573795 GNA11P29992 359 aa24.89■■□□□ 1.58
SNF8-216ENST00000573795 ERVFC1P60507 584 aa24.89■■□□□ 1.58
SNF8-216ENST00000573795 BLOC1S2Q6QNY1 142 aa24.89■■□□□ 1.58
SNF8-216ENST00000573795 ADAMTS10Q9H324 1103 aa24.89■■□□□ 1.58
SNF8-216ENST00000573795 ELAC1Q9H777 363 aaKnown RBP24.89■■□□□ 1.58
SNF8-216ENST00000573795 TLR9Q9NR96 1032 aa24.89■■□□□ 1.58
SNF8-216ENST00000573795 FSCN2O14926 492 aa24.88■■□□□ 1.57
SNF8-216ENST00000573795 MSH4O15457 936 aa24.88■■□□□ 1.57
SNF8-216ENST00000573795 UGCGQ16739 394 aa24.88■■□□□ 1.57
SNF8-216ENST00000573795 SPOUT1Q5T280 376 aaKnown RBP24.88■■□□□ 1.57
SNF8-216ENST00000573795 HFE2Q6ZVN8 426 aa24.88■■□□□ 1.57
SNF8-216ENST00000573795 RNF26Q9BY78 433 aaPredicted RBP24.88■■□□□ 1.57
SNF8-216ENST00000573795 ATP6V0A4Q9HBG4 840 aa24.88■■□□□ 1.57
SNF8-216ENST00000573795 AAASQ9NRG9 546 aa24.88■■□□□ 1.57
SNF8-216ENST00000573795 VPS54Q9P1Q0 977 aa24.88■■□□□ 1.57
SNF8-216ENST00000573795 CEP131Q9UPN4 1083 aa24.88■■□□□ 1.57
SNF8-216ENST00000573795 WDR64B1ANS9 1081 aa24.87■■□□□ 1.57
SNF8-216ENST00000573795 PER2O15055 1255 aa24.87■■□□□ 1.57
SNF8-216ENST00000573795 MAGEB2O15479 319 aa24.87■■□□□ 1.57
SNF8-216ENST00000573795 NLRP11P59045 1033 aaKnown RBP24.87■■□□□ 1.57
SNF8-216ENST00000573795 LRRC55Q6ZSA7 311 aa24.87■■□□□ 1.57
SNF8-216ENST00000573795 LRRC71Q8N4P6 559 aa24.87■■□□□ 1.57
SNF8-216ENST00000573795 FAM167AQ96KS9 214 aa24.87■■□□□ 1.57
SNF8-216ENST00000573795 TLE6Q9H808 572 aa24.87■■□□□ 1.57
SNF8-216ENST00000573795 RNF216Q9NWF9 866 aaPredicted RBP24.87■■□□□ 1.57
SNF8-216ENST00000573795 USP15Q9Y4E8 981 aaPredicted RBP24.87■■□□□ 1.57
SNF8-216ENST00000573795 LOC730098B7Z3J9 87 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 OATP04181 439 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 IFNAR1P17181 557 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 DUSP6Q16828 381 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 EFCAB12Q6NXP0 572 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 THNSL1Q8IYQ7 743 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 CASD1Q96PB1 797 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 SLC26A6Q9BXS9 759 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 NCOA5Q9HCD5 579 aaKnown RBP24.86■■□□□ 1.57
SNF8-216ENST00000573795 DISC1Q9NRI5 854 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 AKT3Q9Y243 479 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 SAMM50Q9Y512 469 aa24.86■■□□□ 1.57
SNF8-216ENST00000573795 EVCP57679 992 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 PRKCEQ02156 737 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 KCNC3Q14003 757 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 CBX2Q14781 532 aaPredicted RBP24.85■■□□□ 1.57
SNF8-216ENST00000573795 CCDC148Q8NFR7 591 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 BICD2Q8TD16 824 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 MICAL1Q8TDZ2 1067 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 SLC5A5Q92911 643 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 GJA10Q969M2 543 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 ZNF668Q96K58 619 aaPredicted RBP24.85■■□□□ 1.57
SNF8-216ENST00000573795 TMEM117Q9H0C3 514 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 TCEAL9Q9UHQ7 104 aa24.85■■□□□ 1.57
SNF8-216ENST00000573795 LAG3P18627 525 aa24.84■■□□□ 1.57
SNF8-216ENST00000573795 PDIA3P30101 505 aaKnown RBP24.84■■□□□ 1.57
SNF8-216ENST00000573795 SUSD6Q92537 303 aa24.84■■□□□ 1.57
SNF8-216ENST00000573795 CCDC136Q96JN2 1154 aa24.84■■□□□ 1.57
SNF8-216ENST00000573795 MAP7D2Q96T17 732 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 300.1 ms