RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 FARP2O94887 1054 aaPredicted RBP32.05■■■□□ 2.72
CTDNEP1-208ENST00000573600 PRKCEQ02156 737 aa32.05■■■□□ 2.72
CTDNEP1-208ENST00000573600 SYCP1Q15431 976 aa32.05■■■□□ 2.72
CTDNEP1-208ENST00000573600 ZC2HC1CQ53FD0 456 aaPredicted RBP32.05■■■□□ 2.72
CTDNEP1-208ENST00000573600 FRMD5Q7Z6J6 570 aa32.05■■■□□ 2.72
CTDNEP1-208ENST00000573600 GOLGA5Q8TBA6 731 aa32.05■■■□□ 2.72
CTDNEP1-208ENST00000573600 PLXNB2O15031 1838 aa32.05■■■□□ 2.72
CTDNEP1-208ENST00000573600 SLC16A3O15427 465 aaKnown RBP32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 TGFB1I1O43294 461 aa32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 NR3C1P04150 777 aa32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 FIGNQ5HY92 759 aa32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 TRIM59Q8IWR1 403 aa32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 ABRAQ8N0Z2 381 aa32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 ST6GALNAC4Q9H4F1 302 aa32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 ZMYM2Q9UBW7 1377 aa32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 CAPN11Q9UMQ6 739 aa32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 TELO2Q9Y4R8 837 aa32.04■■■□□ 2.72
CTDNEP1-208ENST00000573600 IGKV6D-21A0A0A0MT36 114 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 K7ENM7 598 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 NKRFO15226 690 aaKnown RBP eCLIP32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 STRNO43815 780 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 SORBS3O60504 671 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 HUNKP57058 714 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 KCNA1Q09470 495 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 E4F1Q66K89 784 aaPredicted RBP32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 METTL7BQ6UX53 244 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 HS2ST1Q7LGA3 356 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 TRMT1LQ7Z2T5 733 aaKnown RBP32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 DGAT1O75907 488 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 FECHP22830 423 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 PPP2R3AQ06190 1150 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 EEPD1Q7L9B9 569 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 KIFAP3Q92845 792 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 PCMTD1Q96MG8 357 aaPredicted RBP32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 SH2D3AQ9BRG2 576 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 GBP3Q9H0R5 595 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 TMEM206Q9H813 350 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 METTL14Q9HCE5 456 aaKnown RBP32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 ABHD10Q9NUJ1 306 aa32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 SEPT9Q9UHD8 586 aaPredicted RBP32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 DDX41Q9UJV9 622 aaKnown RBP32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 LUC7L2Q9Y383 392 aaKnown RBP32.03■■■□□ 2.72
CTDNEP1-208ENST00000573600 FAM102BQ5T8I3 360 aa32.02■■■□□ 2.72
CTDNEP1-208ENST00000573600 MCPH1Q8NEM0 835 aa32.02■■■□□ 2.72
CTDNEP1-208ENST00000573600 C17orf75Q9HAS0 396 aa32.02■■■□□ 2.72
CTDNEP1-208ENST00000573600 CYP26B1Q9NR63 512 aa32.02■■■□□ 2.72
CTDNEP1-208ENST00000573600 UTP18Q9Y5J1 556 aaKnown RBP eCLIP32.02■■■□□ 2.72
CTDNEP1-208ENST00000573600 PLXNA1Q9UIW2 1896 aa32.02■■■□□ 2.72
CTDNEP1-208ENST00000573600 GGPS1O95749 300 aa32.01■■■□□ 2.72
CTDNEP1-208ENST00000573600 TRIM21P19474 475 aaKnown RBP32.01■■■□□ 2.72
CTDNEP1-208ENST00000573600 KRT9P35527 623 aa32.01■■■□□ 2.72
CTDNEP1-208ENST00000573600 MLXIPQ9HAP2 919 aa32.01■■■□□ 2.72
CTDNEP1-208ENST00000573600 TTC26A0AVF1 554 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 FAM160B1Q5W0V3 765 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 SEPT1Q8WYJ6 367 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 PTPN18Q99952 460 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 TTYH3Q9C0H2 523 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 ARMCX3Q9UH62 379 aaPredicted RBP32■■■□□ 2.71
CTDNEP1-208ENST00000573600 IVNS1ABPQ9Y6Y0 642 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 A0A1W2PQJ5 194 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 GSTTP1A0A1W2PQM5 241 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 EPB41P11171 864 aaKnown RBP32■■■□□ 2.71
CTDNEP1-208ENST00000573600 NCKAP1LP55160 1127 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 ZNF792Q3KQV3 632 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 ZNF526Q8TF50 670 aaPredicted RBP32■■■□□ 2.71
CTDNEP1-208ENST00000573600 ACCSQ96QU6 501 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 CGNQ9P2M7 1197 aaKnown RBP32■■■□□ 2.71
CTDNEP1-208ENST00000573600 SIK3Q9Y2K2 1263 aa32■■■□□ 2.71
CTDNEP1-208ENST00000573600 USP27XA6NNY8 438 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 OATP04181 439 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 SMTNP53814 917 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 GTF2BQ00403 316 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 MYBPC2Q14324 1141 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 LY6KQ17RY6 165 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 FAM110CQ1W6H9 321 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 TMTC1Q8IUR5 882 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 SYCP3Q8IZU3 236 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 OR8K1Q8NGG5 319 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 AFAP1L1Q8TED9 768 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 MKNK1Q9BUB5 465 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 ATP6V0A4Q9HBG4 840 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 PDLIM7Q9NR12 457 aa31.99■■■□□ 2.71
CTDNEP1-208ENST00000573600 CLIC2O15247 247 aa31.98■■■□□ 2.71
CTDNEP1-208ENST00000573600 ZSCAN12O43309 604 aa31.98■■■□□ 2.71
CTDNEP1-208ENST00000573600 ADORA2AP29274 412 aa31.98■■■□□ 2.71
CTDNEP1-208ENST00000573600 RTP1P59025 263 aa31.98■■■□□ 2.71
CTDNEP1-208ENST00000573600 TSR1Q2NL82 804 aaKnown RBP31.98■■■□□ 2.71
CTDNEP1-208ENST00000573600 GPRC5CQ9NQ84 441 aa31.98■■■□□ 2.71
CTDNEP1-208ENST00000573600 TRMT1Q9NXH9 659 aaKnown RBP31.98■■■□□ 2.71
CTDNEP1-208ENST00000573600 RNF225M0QZC1 329 aaPredicted RBP31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 PEX3P56589 373 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 SNRPFP62306 86 aaKnown RBP31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 DMP1Q13316 513 aaPredicted RBP31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 HAUS6Q7Z4H7 955 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 HVCN1Q96D96 273 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 DNAJC7Q99615 494 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 AGPAT3Q9NRZ7 376 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 KCNG1Q9UIX4 513 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 MCM3APO60318 1980 aa31.97■■■□□ 2.71
CTDNEP1-208ENST00000573600 CELF3Q5SZQ8 465 aaKnown RBP31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms