RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SERPINB2P05120 415 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 EEF2P13639 858 aaKnown RBP17.01■□□□□ 0.31
NUP88-207ENST00000573584 SNAP25P60880 206 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 PPP2R2AP63151 447 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 SWT1Q5T5J6 900 aaKnown RBP17.01■□□□□ 0.31
NUP88-207ENST00000573584 CDC42EP5Q6NZY7 148 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 SUGT1Q9Y2Z0 365 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 KDM4FA0A1W2PPD8 638 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 BUB1BO60566 1050 aaPredicted RBP17.01■□□□□ 0.31
NUP88-207ENST00000573584 AGBL2Q5U5Z8 902 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 GLYCTKQ8IVS8 523 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 LNX1Q8TBB1 728 aaPredicted RBP17.01■□□□□ 0.31
NUP88-207ENST00000573584 SEC14L1Q92503 715 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 CCDC17Q96LX7 622 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 FAM20AQ96MK3 541 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 FAM114A2Q9NRY5 505 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 C10orf71Q711Q0 1435 aa17.01■□□□□ 0.31
NUP88-207ENST00000573584 SPDYE3A6NKU9 549 aa17■□□□□ 0.31
NUP88-207ENST00000573584 TRAPPC3O43617 180 aa17■□□□□ 0.31
NUP88-207ENST00000573584 C6orf89Q6UWU4 347 aa17■□□□□ 0.31
NUP88-207ENST00000573584 SLC30A5Q8TAD4 765 aa17■□□□□ 0.31
NUP88-207ENST00000573584 SLC35G2Q8TBE7 412 aa17■□□□□ 0.31
NUP88-207ENST00000573584 TRIM31Q9BZY9 425 aa17■□□□□ 0.31
NUP88-207ENST00000573584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17■□□□□ 0.31
NUP88-207ENST00000573584 TGFB1I1O43294 461 aa17■□□□□ 0.31
NUP88-207ENST00000573584 MAGOHP61326 146 aaKnown RBP17■□□□□ 0.31
NUP88-207ENST00000573584 NFIAQ12857 509 aa17■□□□□ 0.31
NUP88-207ENST00000573584 USH1GQ495M9 461 aa17■□□□□ 0.31
NUP88-207ENST00000573584 DCAF4Q8WV16 495 aa17■□□□□ 0.31
NUP88-207ENST00000573584 MAGOHBQ96A72 148 aaKnown RBP17■□□□□ 0.31
NUP88-207ENST00000573584 AMNQ9BXJ7 453 aa17■□□□□ 0.31
NUP88-207ENST00000573584 COA1Q9GZY4 146 aa17■□□□□ 0.31
NUP88-207ENST00000573584 RABGAP1Q9Y3P9 1069 aa17■□□□□ 0.31
NUP88-207ENST00000573584 NR2E1Q9Y466 385 aa17■□□□□ 0.31
NUP88-207ENST00000573584 STK24Q9Y6E0 443 aa17■□□□□ 0.31
NUP88-207ENST00000573584 MSH4O15457 936 aa17■□□□□ 0.31
NUP88-207ENST00000573584 LMNB1P20700 586 aa17■□□□□ 0.31
NUP88-207ENST00000573584 SOX5P35711 763 aa17■□□□□ 0.31
NUP88-207ENST00000573584 ACTN3Q08043 901 aaPredicted RBP17■□□□□ 0.31
NUP88-207ENST00000573584 PRPF4BQ13523 1007 aaKnown RBP17■□□□□ 0.31
NUP88-207ENST00000573584 SHROOM1Q2M3G4 852 aaPredicted RBP17■□□□□ 0.31
NUP88-207ENST00000573584 KRT71Q3SY84 523 aa17■□□□□ 0.31
NUP88-207ENST00000573584 ZFPM1Q8IX07 1006 aa17■□□□□ 0.31
NUP88-207ENST00000573584 FAM186BQ8IYM0 893 aa17■□□□□ 0.31
NUP88-207ENST00000573584 BORCS6Q96GS4 357 aa17■□□□□ 0.31
NUP88-207ENST00000573584 IKZF4Q9H2S9 585 aa17■□□□□ 0.31
NUP88-207ENST00000573584 RGL1Q9NZL6 768 aa17■□□□□ 0.31
NUP88-207ENST00000573584 CNOT8Q9UFF9 292 aaKnown RBP17■□□□□ 0.31
NUP88-207ENST00000573584 DDX20Q9UHI6 824 aaKnown RBP17■□□□□ 0.31
NUP88-207ENST00000573584 PPP1R9AQ9ULJ8 1098 aa17■□□□□ 0.31
NUP88-207ENST00000573584 TTC7AQ9ULT0 858 aaPredicted RBP17■□□□□ 0.31
NUP88-207ENST00000573584 FOCADQ5VW36 1801 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 FAM196BA6NMK8 535 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 DCDC2CA8MYV0 355 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 F8VZ95 297 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 PPP1R12BO60237 982 aaPredicted RBP16.99■□□□□ 0.31
NUP88-207ENST00000573584 ABCB4P21439 1286 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 PSMC2P35998 433 aaKnown RBP16.99■□□□□ 0.31
NUP88-207ENST00000573584 POU5F1Q01860 360 aaKnown RBP16.99■□□□□ 0.31
NUP88-207ENST00000573584 VPS72Q15906 364 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 C3orf20Q8ND61 904 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 CYP2W1Q8TAV3 490 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 TRIM51Q9BSJ1 452 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 EYA4O95677 639 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 CTNNBL1Q8WYA6 563 aaPredicted RBP16.99■□□□□ 0.31
NUP88-207ENST00000573584 RFFLQ8WZ73 363 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 MKL1Q969V6 931 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 NGLY1Q96IV0 654 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 EIF2AK1Q9BQI3 630 aaKnown RBP16.99■□□□□ 0.31
NUP88-207ENST00000573584 STK33Q9BYT3 514 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 VCPKMTQ9H867 229 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 OLFML3Q9NRN5 406 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 ATP8A1Q9Y2Q0 1164 aa16.99■□□□□ 0.31
NUP88-207ENST00000573584 TMEM253P0C7T8 217 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 POLD1P28340 1107 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 HOXA10P31260 410 aaPredicted RBP16.98■□□□□ 0.31
NUP88-207ENST00000573584 SREBF1P36956 1147 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 SETQ01105 290 aaPredicted RBP16.98■□□□□ 0.31
NUP88-207ENST00000573584 IFFO1Q0D2I5 559 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 DRAP1Q14919 205 aaPredicted RBP16.98■□□□□ 0.31
NUP88-207ENST00000573584 RINT1Q6NUQ1 792 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 CCDC121Q6ZUS5 278 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 CCDC13Q8IYE1 715 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 MYCT1Q8N699 235 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 C8orf37Q96NL8 207 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 DNAJC18Q9H819 358 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 DNAJC12Q9UKB3 198 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 VAV3Q9UKW4 847 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 BTAF1O14981 1849 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 FAM170AA1A519 330 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 EML1O00423 815 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 FOSP01100 380 aaPredicted RBP16.98■□□□□ 0.31
NUP88-207ENST00000573584 NMT1P30419 496 aaKnown RBP16.98■□□□□ 0.31
NUP88-207ENST00000573584 APOBEC3HQ6NTF7 200 aaKnown RBP16.98■□□□□ 0.31
NUP88-207ENST00000573584 ADAT2Q7Z6V5 191 aaKnown RBP16.98■□□□□ 0.31
NUP88-207ENST00000573584 PIGOQ8TEQ8 1089 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 RAPGEF5Q92565 580 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 FMO2Q99518 471 aa16.98■□□□□ 0.31
NUP88-207ENST00000573584 POLR3CQ9BUI4 534 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms