RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 ELMO3Q96BJ8 720 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 FAM84AQ96KN4 292 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 PSMC5P62195 406 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 KRT76Q01546 638 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 SPAG1Q07617 926 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 LDLRAD1Q5T700 205 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 MB21D1Q8N884 522 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 TRAPPC12Q8WVT3 735 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 TUFT1Q9NNX1 390 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 TRPC6Q9Y210 931 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 FHOD1Q9Y613 1164 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
TVP23A-207ENST00000573360 KCNJ6P48051 423 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 RARRES1P49788 294 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 FXR1P51114 621 aaKnown RBP eCLIP15.3■□□□□ 0.04
TVP23A-207ENST00000573360 POLGP54098 1239 aaPredicted RBP15.3■□□□□ 0.04
TVP23A-207ENST00000573360 OAZ1P54368 228 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 NEK11Q8NG66 645 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 PARD6BQ9BYG5 372 aa15.3■□□□□ 0.04
TVP23A-207ENST00000573360 SBF1O95248 1867 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 LRRIQ4A6NIV6 560 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 CETN3O15182 167 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 FANCGO15287 622 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 ZNF862O60290 1169 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 UBA1P22314 1058 aaKnown RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 HSDL1Q3SXM5 330 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 GUF1Q8N442 669 aaKnown RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 SPATA33Q96N06 139 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 ZIC5Q96T25 663 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 PTPN18Q99952 460 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 AZI2Q9H6S1 392 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 ARIH2O95376 493 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 PSAPP07602 524 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 OAS2P29728 719 aaKnown RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 HOXA7P31268 230 aaPredicted RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 HS2ST1Q7LGA3 356 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 CCDC127Q96BQ5 260 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 INPP4AQ96PE3 977 aaPredicted RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 ADAMTS5Q9UNA0 930 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 ARFGEF1Q9Y6D6 1849 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 EXOC3O60645 756 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 TFRCP02786 760 aaKnown RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 CCNA1P78396 465 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 FKBP3Q00688 224 aaKnown RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 NR1I3Q14994 352 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 SKIDA1Q1XH10 827 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 CDKAL1Q5VV42 579 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 SPRYD7Q5W111 196 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 CACNA2D4Q7Z3S7 1137 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 LRRC71Q8N4P6 559 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 LENG1Q96BZ8 264 aaPredicted RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 LARSQ9P2J5 1176 aaKnown RBP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 PNMA2Q9UL42 364 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 KCNH4Q9UQ05 1017 aa15.29■□□□□ 0.04
TVP23A-207ENST00000573360 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
TVP23A-207ENST00000573360 RAD9BQ6WBX8 426 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 ATP6V0A1Q93050 837 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 KCND1Q9NSA2 647 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 GUCA1BQ9UMX6 200 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 RNF225M0QZC1 329 aaPredicted RBP15.28■□□□□ 0.04
TVP23A-207ENST00000573360 CNMDO75829 334 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 KCNA2P16389 499 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 TCF7P36402 384 aaPredicted RBP15.28■□□□□ 0.04
TVP23A-207ENST00000573360 PLA2G4AP47712 749 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 C1orf186Q6ZWK4 172 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 ANO5Q75V66 913 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 SCLT1Q96NL6 688 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 ZNF302Q9NR11 478 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 RPTORQ8N122 1335 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 A0A1B0GTH6 734 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 SRGAP2CP0DJJ0 459 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 MIS18BP1Q6P0N0 1132 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 CDR2LQ86X02 465 aaPredicted RBP15.28■□□□□ 0.04
TVP23A-207ENST00000573360 FAM114A1Q8IWE2 563 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
TVP23A-207ENST00000573360 PFASO15067 1338 aa15.27■□□□□ 0.04
TVP23A-207ENST00000573360 PHACTR2O75167 634 aa15.27■□□□□ 0.04
TVP23A-207ENST00000573360 SMC1AQ14683 1233 aaKnown RBP15.27■□□□□ 0.04
TVP23A-207ENST00000573360 KNOP1Q1ED39 458 aaKnown RBP15.27■□□□□ 0.04
TVP23A-207ENST00000573360 TMEM139Q8IV31 216 aa15.27■□□□□ 0.04
TVP23A-207ENST00000573360 GPRASP2Q96D09 838 aa15.27■□□□□ 0.04
TVP23A-207ENST00000573360 TCHPQ9BT92 498 aa15.27■□□□□ 0.04
TVP23A-207ENST00000573360 AGPAT5Q9NUQ2 364 aa15.27■□□□□ 0.04
TVP23A-207ENST00000573360 GJB1P08034 283 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 TRIM49P0CI25 452 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 TRIM49CP0CI26 452 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 HTRA3P83110 453 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 CHADLQ6NUI6 762 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 GPR161Q8N6U8 529 aaKnown RBP15.27■□□□□ 0.03
TVP23A-207ENST00000573360 ADCYAP1R1P41586 468 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 JAK3P52333 1124 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 IRX5P78411 483 aaPredicted RBP15.27■□□□□ 0.03
TVP23A-207ENST00000573360 GPS2Q13227 327 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 CENPPQ6IPU0 288 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 SLC35F6Q8N357 371 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 SAAL1Q96ER3 474 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 CDHR1Q96JP9 859 aa15.27■□□□□ 0.03
TVP23A-207ENST00000573360 MS4A4AQ96JQ5 239 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms