RNA–Protein interactions for RNA: ENST00000571725.1

RPA1-204, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-204ENST00000571725 USP36Q9P275 1121 aaKnown RBP3.91□□□□□ -1.78
RPA1-204ENST00000571725 CBLCQ9ULV8 474 aa3.91□□□□□ -1.78
RPA1-204ENST00000571725 SRPK3Q9UPE1 567 aa3.91□□□□□ -1.78
RPA1-204ENST00000571725 NOC2LQ9Y3T9 749 aaKnown RBP3.91□□□□□ -1.78
RPA1-204ENST00000571725 EID1Q9Y6B2 187 aa3.91□□□□□ -1.78
RPA1-204ENST00000571725 TOP2BQ02880 1626 aa3.91□□□□□ -1.78
RPA1-204ENST00000571725 CUX1P39880 1505 aa3.9□□□□□ -1.78
RPA1-204ENST00000571725 GOLGA6CA6NDK9 693 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 GOLGA6BA6NDN3 693 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 K7ESF4 209 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 SRGAP3O43295 1099 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 NTRK1P04629 796 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 CYBBP04839 570 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 CT47B1P0C2W7 299 aaPredicted RBP3.9□□□□□ -1.79
RPA1-204ENST00000571725 GOLGA6DP0CG33 693 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 COL6A2P12110 1019 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 VCAM1P19320 739 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 NEK2P51955 445 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 KIF11P52732 1056 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 JAM2P57087 298 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 PHC1P78364 1004 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 MTMR1Q13613 665 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 LRRC32Q14392 662 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 EMC4Q5J8M3 183 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 HABP4Q5JVS0 413 aaKnown RBP3.9□□□□□ -1.79
RPA1-204ENST00000571725 CC2D1AQ6P1N0 951 aaPredicted RBP3.9□□□□□ -1.79
RPA1-204ENST00000571725 PAQR3Q6TCH7 311 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 RPTNQ6XPR3 784 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 FRMD7Q6ZUT3 714 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.9□□□□□ -1.79
RPA1-204ENST00000571725 NLRP10Q86W26 655 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 RASSF3Q86WH2 238 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 PTRH1Q86Y79 214 aaKnown RBP3.9□□□□□ -1.79
RPA1-204ENST00000571725 CNTD1Q8N815 330 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 KIAA1958Q8N8K9 716 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 PIP4K2CQ8TBX8 421 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 CHTF18Q8WVB6 975 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 DDX11Q96FC9 970 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 CAMKK2Q96RR4 588 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 CRAMP1Q96RY5 1269 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 DEF6Q9H4E7 631 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 AASDHPPTQ9NRN7 309 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 TOMM22Q9NS69 142 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 GOLGA6AQ9NYA3 693 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 MYOTQ9UBF9 498 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 PCDHB4Q9Y5E5 795 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 WDR97A6NE52 1622 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 POLA1P09884 1462 aaPredicted RBP3.9□□□□□ -1.79
RPA1-204ENST00000571725 IFT140Q96RY7 1462 aa3.9□□□□□ -1.79
RPA1-204ENST00000571725 SYNJ1O43426 1573 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 TARBP1Q13395 1621 aaKnown RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 SHTN1A0MZ66 631 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 SCDO00767 359 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 SNUPNO95149 360 aaKnown RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 PARNO95453 639 aaKnown RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 TACR1P25103 407 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 FNTBP49356 437 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 SARSP49591 514 aaKnown RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 EPHA5P54756 1037 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 KLF1Q13351 362 aaPredicted RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 PPP2R5AQ15172 486 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 CDSNQ15517 529 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 SKIDA1Q1XH10 827 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 PLEKHN1Q494U1 663 aaPredicted RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 TIGD7Q6NT04 549 aaPredicted RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 LIMS2Q7Z4I7 341 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 MILR1Q7Z6M3 343 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 FMNL3Q8IVF7 1028 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 CCAR1Q8IX12 1150 aaKnown RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 ZNF610Q8N9Z0 462 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 ACAP3Q96P50 834 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 FAM126AQ9BYI3 521 aaPredicted RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 SPTLC3Q9NUV7 552 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 NTMQ9P121 344 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 PPARGC1AQ9UBK2 798 aaKnown RBP3.89□□□□□ -1.79
RPA1-204ENST00000571725 FBXL7Q9UJT9 491 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 B3GALT1Q9Y5Z6 326 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 FGD5Q6ZNL6 1462 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 IRS2Q9Y4H2 1338 aa3.89□□□□□ -1.79
RPA1-204ENST00000571725 MAN2B1O00754 1011 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 KIF3BO15066 747 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 NKRFO15226 690 aaKnown RBP eCLIP3.88□□□□□ -1.79
RPA1-204ENST00000571725 GLI4P10075 376 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 MTHFD2P13995 350 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 MAPKAPK2P49137 400 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 HERVK_113P62684 666 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 KRT85P78386 507 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 KIAA2012Q0VF49 1180 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 TUSC3Q13454 348 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 HLTFQ14527 1009 aaKnown RBP eCLIP3.88□□□□□ -1.79
RPA1-204ENST00000571725 TMEM132BQ14DG7 1078 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 EPHA7Q15375 998 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 BROXQ5VW32 411 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 BTBD8Q5XKL5 378 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 BORAQ6PGQ7 559 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 FAM124AQ86V42 546 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 PNMA8AQ86V59 439 aaPredicted RBP3.88□□□□□ -1.79
RPA1-204ENST00000571725 ZC3H18Q86VM9 953 aaKnown RBP3.88□□□□□ -1.79
RPA1-204ENST00000571725 LGI4Q8N135 537 aa3.88□□□□□ -1.79
RPA1-204ENST00000571725 TTLL11Q8NHH1 800 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms